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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araha.9776s0006.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family | NAC | ||||||||
Protein Properties | Length: 157aa MW: 18545 Da PI: 10.2589 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 29.2 | 2.6e-09 | 26 | 122 | 32 | 127 |
NAM 32 evikevdiykvePwdL..pkkvkaeekewyfFskrdkkyatgkrknratk....sgyWkatgkdkevlskkgelvglkktLvfykgrapk 115 i ++++y+ P d p +v+ + ++ + F++r + +++++++nra++ +g+W+ k k++++ ++++ g +++L f + a + Araha.9776s0006.1.p 26 FLIGDFELYEKTPLDDdyPGNVYFSPHNFWCFVERTRLSPNSSQPNRAIRqnrcNGRWRYNSK-KPIIR-NTQTLGYREILDFVN--A-D 110 358999999999976511557777888999*****************97767779****8876.88888.899**********93..3.3 PP NAM 116 gektdWvmheyr 127 +kt W ey Araha.9776s0006.1.p 111 NKKTGWRQSEYV 122 368****99996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 11.674 | 1 | 139 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 4.05E-10 | 9 | 128 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence Send to blast |
MTTKRRSSIY MNFLLRLRGE RDRPDFLIGD FELYEKTPLD DDYPGNVYFS PHNFWCFVER 60 TRLSPNSSQP NRAIRQNRCN GRWRYNSKKP IIRNTQTLGY REILDFVNAD NKKTGWRQSE 120 YVKSVDDGTF QVVSVVLMML LISKNSSKRN HYSSDK* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araha.9776s0006.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM17442 | 7 | 9 |
Link Out ? help Back to Top | |
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Phytozome | Araha.9776s0006.1.p |