PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araha.8919s0002.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family | bZIP | ||||||||
Protein Properties | Length: 278aa MW: 30466.7 Da PI: 5.2025 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 54.7 | 2.2e-17 | 120 | 171 | 3 | 54 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +lkr rr+ +NRe+A+rsR+RK++++ Le+ v++L++ N++L k+l ++ Araha.8919s0002.1.p 120 DLKRIRRMNSNRESAKRSRRRKQEYLVDLETQVDSLKGDNSTLYKQLIDATQ 171 79*****************************************988765555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.3E-13 | 113 | 173 | No hit | No description |
SMART | SM00338 | 2.0E-15 | 118 | 182 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.5E-15 | 120 | 166 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.645 | 120 | 166 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.13E-11 | 121 | 171 | No hit | No description |
CDD | cd14702 | 4.59E-20 | 123 | 174 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 125 | 140 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 2.3E-5 | 189 | 266 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0071333 | Biological Process | cellular response to glucose stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence Send to blast |
MDAHTAKDIG MKRSASELAL QEYLTTSPLD PCFDLMNRDY TCELRDILLW SEGLIPAGTF 60 RDAQSSICEN LSADSPVSAN KPEVREGVRR TVSGSSHVNS DEEDAETEAG QSEMTNDPND 120 LKRIRRMNSN RESAKRSRRR KQEYLVDLET QVDSLKGDNS TLYKQLIDAT QQFRSAGTNN 180 RVLKSDVETL RVKVKLAEDL VARGSLTSSL NQLLQTHLSP PSHSINSLHY TGNTSPAITV 240 HSDQSLFPGM TLSGQNSSSG LGNVSSEAVS CVSDIWT* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 136 | 141 | SRRRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araha.8919s0002.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Repressed by glucose. {ECO:0000269|PubMed:18841482}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AF310223 | 0.0 | AF310223.1 Arabidopsis thaliana bZIP protein BZO2H2 mRNA, complete cds. | |||
GenBank | AK226873 | 0.0 | AK226873.1 Arabidopsis thaliana mRNA for bZIP protein BZO2H2, clone: RAFL09-07-B02. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002872127.1 | 0.0 | basic leucine zipper 9 isoform X1 | ||||
Swissprot | Q9FUD3 | 0.0 | BZIP9_ARATH; Basic leucine zipper 9 | ||||
TrEMBL | D7M389 | 0.0 | D7M389_ARALL; Uncharacterized protein | ||||
STRING | scaffold_602583.1 | 0.0 | (Arabidopsis lyrata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM6370 | 26 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24800.1 | 1e-176 | basic leucine zipper 9 |
Link Out ? help Back to Top | |
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Phytozome | Araha.8919s0002.1.p |
Publications ? help Back to Top | |||
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