PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araha.21147s0003.1.p
Organism
Arabidopsis halleri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family bZIP
Protein Properties Length: 137aa    MW: 16349.1 Da    PI: 6.6808
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araha.21147s0003.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1262e-083578447
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47
                           kr rr++ NRe+ArrsR R ++  e L+  vk+L a N+ L +
  Araha.21147s0003.1.p 35 EKRLRRMATNRESARRSRMRERMMKEVLQMQVKQLMASNQLLSN 78
                          59*************************************86654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-43296IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.7E-83290No hitNo description
PfamPF077161.0E-103383IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.4613497IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.38E-83691No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    Send to blast
MFQQNPQDED VHVHDHVDNH DHYHHQQPNV VMDQEKRLRR MATNRESARR SRMRERMMKE  60
VLQMQVKQLM ASNQLLSNKY ISLLEYNHQI LQENSQLKET VSSFHDQYTI SYGKHEDILG  120
NINDFDSNQQ SPYQPT*
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraha.21147s0003.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAL3576121e-165AL357612.1 Arabidopsis thaliana DNA chromosome 5, BAC clone T22D6 (ESSA project).
GenBankCP0026881e-165CP002688.1 Arabidopsis thaliana chromosome 5 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_850791.17e-68basic leucine-zipper 75
TrEMBLA0A178U7S52e-66A0A178U7S5_ARATH; BZIP75
TrEMBLF4K9L72e-66F4K9L7_ARATH; Basic leucine-zipper 75
TrEMBLQ9LEZ23e-62Q9LEZ2_ARATH; Uncharacterized protein T22D6_80
STRINGAT5G08141.13e-67(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM17031811
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08141.11e-53basic leucine-zipper 75