PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araha.21009s0001.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family | bZIP | ||||||||
Protein Properties | Length: 306aa MW: 33753.1 Da PI: 10.4686 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 48.2 | 2.3e-15 | 143 | 197 | 4 | 58 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 +kr +r+ +NRe+ArrsR+RK+a + eLe+ v +L eN++L k l +++ + Araha.21009s0001.2.p 143 VKRVKRMLSNRESARRSRRRKQAHLSELETQVSQLRVENSKLMKGLTDVTQTFNE 197 79*****************************************998887777665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.4E-17 | 140 | 204 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.99 | 142 | 205 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.57E-12 | 143 | 194 | No hit | No description |
Pfam | PF00170 | 2.1E-13 | 143 | 191 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.5E-11 | 144 | 194 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 147 | 162 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 3.0E-12 | 211 | 255 | IPR020983 | Basic leucine-zipper, C-terminal |
Pfam | PF12498 | 2.0E-5 | 273 | 300 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0071215 | Biological Process | cellular response to abscisic acid stimulus | ||||
GO:0071333 | Biological Process | cellular response to glucose stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042802 | Molecular Function | identical protein binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence Send to blast |
RYYSCRGHWG NNQTIKYLTK KQKELKEQII KMQRLANRIR RNYDGESTTA CGVSVSSPPN 60 VPVDSDEYRA FLKSKLNLAC AAVAMKRDTS GRSDNGGATA SEQGSLASSK ATPMMSSAIT 120 SGSELSGDEE EADGETNMNP TNVKRVKRML SNRESARRSR RRKQAHLSEL ETQVSQLRVE 180 NSKLMKGLTD VTQTFNEASV ENRVLKANIE TLRAKVKMAE ESVKRLTGFN PMFHTMPQIV 240 STVSLPSETS NSVDTTGSQV TAPEIISSGN KSKALIGCKM NRTASMRRVE SLEHLQKRIR 300 SVGDQ* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 156 | 163 | RRSRRRKQ |
2 | 158 | 163 | SRRRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in controlling responses to starvation (PubMed:26263501). BZIP2-BZIP63-KIN10 complex binds to the ETFQO promoter to up-regulate its transcription (PubMed:29348240). {ECO:0000269|PubMed:26263501, ECO:0000269|PubMed:29348240}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00040 | PBM | Transfer from AT5G28770 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araha.21009s0001.2.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Strongly repressed by glucose. {ECO:0000269|PubMed:18841482}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AF446876 | 0.0 | AF446876.1 Arabidopsis thaliana AT5g28770/T32B20_60 mRNA, complete cds. | |||
GenBank | AY052688 | 0.0 | AY052688.1 Arabidopsis thaliana AT5g28770/T32B20_60 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020879233.1 | 1e-177 | basic leucine zipper 63 isoform X2 | ||||
Swissprot | B9DGI8 | 1e-169 | BZP63_ARATH; Basic leucine zipper 63 | ||||
TrEMBL | D7M6Y6 | 1e-172 | D7M6Y6_ARALL; Uncharacterized protein | ||||
STRING | fgenesh2_kg.6__2797__AT5G28770.2 | 1e-173 | (Arabidopsis lyrata) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28770.1 | 1e-162 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Araha.21009s0001.2.p |
Publications ? help Back to Top | |||
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