PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.ZJ7WT
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 218aa    MW: 24838.1 Da    PI: 8.0201
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.ZJ7WTgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR163.75.4e-2075166490
         FAR1   4 neYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  ++Y++  GFs+r+ k  +      +g i+++ fvCs++g+r+ ++ + ++++  +r++tr+gC+a++kv+ ++ +g+w+v+ ++ eHnH++ 
  Aradu.ZJ7WT  75 EFYGRIKGFSIRRLKVGRCkkaGSEGDIIWQIFVCSRQGERDAKHVHrNDRKMDPRQVTRCGCNARIKVHVHSrNGRWYVDFFSDEHNHDML 166
                  579********9877655522267889**************9998774677778*****************999***************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031017.6E-1875166IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    Send to blast
MEGTEEVSSN FQENVTSGVE EDPIENETFV AETKSVPIGA SQSDDQRDVI VLDGIGSFGA  60
IDFDALRAKE IMMIEFYGRI KGFSIRRLKV GRCKKAGSEG DIIWQIFVCS RQGERDAKHV  120
HRNDRKMDPR QVTRCGCNAR IKVHVHSRNG RWYVDFFSDE HNHDMLEARF RGMMRSHRAI  180
KMGDLHQINT MRSSGLRVST IFRAFANQSG GFEMVGFQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.ZJ7WT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025702767.11e-140protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445D6S41e-139A0A445D6S4_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3290752
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-16FAR1-related sequence 5