PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Aradu.Z3V4L

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 88aa MW: 10120.1 Da PI: 4.3031

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.Z3V4L	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	25.6	4e-08	51	87	1	39
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskeg 39 kfY++YAk +GFs+r+++++++ ++ei+++ +Cs+e Aradu.Z3V4L 51 KFYRNYAKVAGFSTRVRSTNRK--ENEIKNQLITCSREE 87 6**************98887..7779******985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	2.0E-5	51	87	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 88 aa Download sequence Send to blast
MVDSTSDSQL NQDEVDYEFE SNEVPEPLSV VDDQFVPKVG MTYTTLEDAG KFYRNYAKVA 60 GFSTRVRSTN RKENEIKNQL ITCSREEK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.Z3V4L

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HQ637178	1e-73	HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020981425.1	3e-47	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445ETX2	5e-54	A0A445ETX2_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	2e-06	FAR1-related sequence 10