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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.YK9C7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | WRKY | ||||||||
Protein Properties | Length: 200aa MW: 22303.3 Da PI: 9.816 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 91.6 | 6.2e-29 | 43 | 100 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYG+K+ k+s+fprsYYrCt gC++kk+v+r +dp+ v itY g H h+ Aradu.YK9C7 43 EDGYKWRKYGKKSLKKSPFPRSYYRCTAIGCNAKKRVDRYMDDPTHVLITYVGLHAHD 100 8********************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.1E-28 | 30 | 102 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.35E-26 | 35 | 102 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 27.473 | 37 | 102 | IPR003657 | WRKY domain |
SMART | SM00774 | 7.1E-29 | 42 | 101 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.2E-22 | 43 | 99 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence Send to blast |
MGLKLRASTM ASVADTMRMN NKRNKNNLSK ITYMTESESE SLEDGYKWRK YGKKSLKKSP 60 FPRSYYRCTA IGCNAKKRVD RYMDDPTHVL ITYVGLHAHD LPPILPPPSR SFNLYNNSTV 120 SPKLGKGSGV QKPILSDASA GARERMYANN TITSVNVRTG NDSCVNDVGP IEDIGTGLLE 180 DINLSSIAPH YQHHQPTFYS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 2e-22 | 34 | 102 | 9 | 77 | Probable WRKY transcription factor 4 |
2lex_A | 2e-22 | 34 | 102 | 9 | 77 | Probable WRKY transcription factor 4 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.YK9C7 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015948912.1 | 1e-146 | probable WRKY transcription factor 71 | ||||
TrEMBL | A0A445AFD3 | 1e-106 | A0A445AFD3_ARAHY; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF23644 | 2 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47260.1 | 4e-30 | WRKY DNA-binding protein 23 |