PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.Y9JNS
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NAC
Protein Properties Length: 369aa    MW: 41613.8 Da    PI: 8.1199
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.Y9JNSgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.87.6e-52191461128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 
                  lppGfrFhPtd+el+++yL+ kv ++++++++v + evd++++ePw+Lp+ +k +e+ewy +s rd+ky+tg r+nrat++gyWkatgkdk+v+  +g
  Aradu.Y9JNS  19 LPPGFRFHPTDQELITFYLASKVFNTTTTTTHVnFVEVDLNRCEPWELPEVAKMGEREWYLYSVRDRKYPTGLRTNRATAAGYWKATGKDKQVYG-GG 115
                  79************************98887878***************8888999***************************************.99 PP

          NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                   lvg+kktLvfykgrap+g+kt+Wvmhe+rl
  Aradu.Y9JNS 116 GLVGMKKTLVFYKGRAPRGQKTKWVMHEFRL 146
                  9****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.16E-6014167IPR003441NAC domain
PROSITE profilePS5100557.02819167IPR003441NAC domain
PfamPF023652.3E-2520146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010014Biological Processmeristem initiation
GO:0010199Biological Processorgan boundary specification between lateral organs and the meristem
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    Send to blast
MEELACELSD HEKRNAQGLP PGFRFHPTDQ ELITFYLASK VFNTTTTTTH VNFVEVDLNR  60
CEPWELPEVA KMGEREWYLY SVRDRKYPTG LRTNRATAAG YWKATGKDKQ VYGGGGLVGM  120
KKTLVFYKGR APRGQKTKWV MHEFRLDPHS SPSLSKDEWV ICRIFHKSGE KRTPTTTPAP  180
LLLHHQQHDP SSLFNDHISH SHNHNQNLLS PLLHPFPIPE ETTKTKSSTI NSNHYPPPPP  240
SSQHLLKLNK STKLTKTVPP SPSFFQYQQL LEDDPNLLHW MDSGNNNNNN CKANNTASSV  300
EIMDAAAAGL IAFSSGGPSP TPTNNNNNNS EIIRDMMMMS SSSASMLHIL DDAPLGIQSW  360
PHHHHHHLL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-49111704171Stress-induced transcription factor NAC1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00241DAPTransfer from AT1G76420Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.Y9JNS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020984011.10.0protein CUP-SHAPED COTYLEDON 3
TrEMBLA0A445BRS40.0A0A445BRS4_ARAHY; Uncharacterized protein
STRINGAES741211e-108(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF78883347
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76420.12e-86NAC family protein