PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.Y3PUS
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 202aa    MW: 23497.7 Da    PI: 8.6215
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.Y3PUSgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR151.43.7e-1652137189
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                  +f+ +Y+ ++ F vrk++s+k+  ng+i + +f C keg r+++k++ + +   r etrt+C+ kl ++  k  +k+e+++++  HnH+l
  Aradu.Y3PUS  52 QFWIDYGGRMEFGVRKQYSNKN-ANGKILSLRFICVKEGVRKSDKRD-SLTVILRLETRTNCDVKLGIRYIKgIEKYEIHDFS--HNHPL 137
                  699*****************99.8888*****************999.99999******************999******996..88887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.5E-1152137IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MSCDANRRGR REDHFGEIGD VQRFLNAQNM DIEFDWLPKL GKTFNIVGEA WQFWIDYGGR  60
MEFGVRKQYS NKNANGKILS LRFICVKEGV RKSDKRDSLT VILRLETRTN CDVKLGIRYI  120
KGIEKYEIHD FSHNHPLHLP QTTHMLACQQ KISQVQAQEI EMADDSGITE RASFELMSRQ  180
VGGRENIGYT RLDQKNIFVP KE
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.Y3PUS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020986514.11e-103protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025616747.11e-102protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A2K3PRH28e-69A0A2K3PRH2_TRIPR; Protein FAR1-related sequence 5-like
STRINGXP_004506622.19e-51(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF30451449
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-09FAR1-related sequence 5