PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.XE8WZ

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

NAC

Protein Properties

Length: 300aa MW: 33034.6 Da PI: 4.9452

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.XE8WZ	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	93.9	2.6e-29	38	116	50	128
NAM 50 kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++k+++ ewyfF+ r k+y g+++nra+k+gyWkatg dk+++++++++vg+ ktLvf++g+ p+g++tdWvmheyrl Aradu.XE8WZ 38 HLKSGDLEWYFFCARGKNYGIGSKTNRAIKNGYWKATGMDKAIVQHDKQTVGMMKTLVFHTGKPPHGTRTDWVMHEYRL 116 4566788**********************************************************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	33.64	1	139	IPR003441	NAC domain
SuperFamily	SSF101941	8.11E-35	37	139	IPR003441	NAC domain
Pfam	PF02365	8.3E-15	41	116	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence Send to blast
MSTQKYTQQA KSGFFNVAGA NSIFNQDFSV MKISSKSHLK SGDLEWYFFC ARGKNYGIGS 60 KTNRAIKNGY WKATGMDKAI VQHDKQTVGM MKTLVFHTGK PPHGTRTDWV MHEYRLQDKD 120 LTDKGIAQDS YVICKVFRKE GHGPRSGAQY RKPFNEEDWD DDDDDDDDHH VVEEGGTPST 180 ALVAPVSIQS MTLDGSSYMK ATSVSCESGP VATSPVPSTP SSDASIHTVN NSTVTDLSKD 240 EKTVPKENIA AGDLLSKFFE GLEDLESEYT PNGMGLDGFA PNGINYDDLG HLDLIDCNFL

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	1e-26	42	140	69	166	NO APICAL MERISTEM PROTEIN
1ut4_B	1e-26	42	140	69	166	NO APICAL MERISTEM PROTEIN
1ut7_A	1e-26	42	140	69	166	NO APICAL MERISTEM PROTEIN
1ut7_B	1e-26	42	140	69	166	NO APICAL MERISTEM PROTEIN
3swm_A	1e-26	42	140	72	169	NAC domain-containing protein 19
3swm_B	1e-26	42	140	72	169	NAC domain-containing protein 19
3swm_C	1e-26	42	140	72	169	NAC domain-containing protein 19
3swm_D	1e-26	42	140	72	169	NAC domain-containing protein 19
3swp_A	1e-26	42	140	72	169	NAC domain-containing protein 19
3swp_B	1e-26	42	140	72	169	NAC domain-containing protein 19
3swp_C	1e-26	42	140	72	169	NAC domain-containing protein 19
3swp_D	1e-26	42	140	72	169	NAC domain-containing protein 19
4dul_A	1e-26	42	140	69	166	NAC domain-containing protein 19
4dul_B	1e-26	42	140	69	166	NAC domain-containing protein 19
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.XE8WZ

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020994476.1	0.0	NAC domain-containing protein 82 isoform X1
Refseq	XP_020994477.1	0.0	NAC domain-containing protein 82 isoform X1
TrEMBL	A0A444ZXY8	1e-112	A0A444ZXY8_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF30453	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64060.1	3e-46	NAC domain containing protein 103