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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Aradu.W06MF |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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| Family |
C2H2 |
| Protein Properties |
Length: 360aa MW: 39980.3 Da PI: 9.5307 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aradu.W06MF | genome | NCGR_PGC | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 14.3 | 0.00012 | 224 | 246 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C++Cgk+F+++ L +H + +
Aradu.W06MF 224 HQCENCGKTFRSSRALGSHRSIC 246
79*****************9985 PP
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| Protein Features
? help Back to Top |
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| Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
| SMART | SM00355 | 2.5 | 5 | 27 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE profile | PS50157 | 9.307 | 5 | 32 | IPR007087 | Zinc finger, C2H2 |
| Pfam | PF13912 | 4.3E-7 | 6 | 28 | IPR007087 | Zinc finger, C2H2 |
| PROSITE pattern | PS00028 | 0 | 6 | 27 | IPR007087 | Zinc finger, C2H2 |
| SuperFamily | SSF57667 | 5.12E-7 | 6 | 27 | No hit | No description |
| SuperFamily | SSF57667 | 5.12E-7 | 219 | 243 | No hit | No description |
| Pfam | PF13912 | 0.004 | 224 | 243 | IPR007087 | Zinc finger, C2H2 |
| PROSITE profile | PS50157 | 8.933 | 224 | 245 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 30 | 224 | 244 | IPR015880 | Zinc finger, C2H2-like |
| Pfam | PF13912 | 7.4E-8 | 259 | 282 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 0.2 | 259 | 281 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE profile | PS50157 | 9.245 | 259 | 281 | IPR007087 | Zinc finger, C2H2 |
| PROSITE pattern | PS00028 | 0 | 261 | 281 | IPR007087 | Zinc finger, C2H2 |
| Sequence ? help Back to Top |
| Protein Sequence Length: 360 aa
Download sequence Send
to blast |
MERQKCCKLC SRTFPNGRAL GGHMKAHLAT FPLPPKPPQP PAPPLPSSES SSSFSSFSES 60
EPEDKTALIY GLRENPKKSF RVADPEFSPL AAPLLPPPDS VAVQDRESET ESSKKPTRQR 120
SKRTWRARSI LHNHEDDKEQ LKKKQPKLGF MEHEHEYEAE PVSSVSETSV VEDVAMFLVM 180
LSRDTWSNKD AILVKQEGEV ERSKAGSGNG IKMKKVRVRG KHSHQCENCG KTFRSSRALG 240
SHRSICCDGG GSGASDRIFQ CPFCFKIFGS GQALGGHKRS HLIAMAAPSS SSSTAKNFID 300
LNLPAPLEEQ HEDDLGVVSD TLSSALKRTK YPGKRREVPY NSYRRISQVY DNKVQDMLIK
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