PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Aradu.VDA9L

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

Trihelix

Protein Properties

Length: 110aa MW: 11307.3 Da PI: 4.4679

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.VDA9L	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	40	1e-12	60	96	1	37
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskk 37 rW++qe+laL+++r++me ++r+++ k+plWe+vs++ Aradu.VDA9L 60 RWPRQETLALLRIRSDMEAAFREASVKGPLWEQVSSF 96 8**********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 110 aa Download sequence Send to blast
MLGDSALLGG GGSSGGASDD AVAAAAAVAA SGGGGGSNNS GDDERGRNIE EGGSSFGGNR 60 WPRQETLALL RIRSDMEAAF REASVKGPLW EQVSSFRGFH FFIKSWDVEI

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.VDA9L

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025621109.1	1e-58	trihelix transcription factor GT-2 isoform X1
TrEMBL	A0A445BDJ3	1e-54	A0A445BDJ3_ARAHY; Uncharacterized protein
STRING	GLYMA20G30640.1	4e-27	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21033	4	4

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	2e-19	Trihelix family protein