PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.V7BYP
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 306aa    MW: 33945 Da    PI: 8.1328
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.V7BYPgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.23.9e-103079154
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 r++ +  rE+ RRdr+N+ f+ L   l ++     ++++Ka+iL+ +++ +k+L
  Aradu.V7BYP 30 RKVQKADREKLRRDRLNDHFHDLANTLDPD----RPRNDKATILTDTIQMLKDL 79
                 5677889********************997....799***************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.7862979IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-1129101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.7E-83079IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.14E-123097IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.62E-73083No hitNo description
SMARTSM003532.6E-63585IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MNALISKVAR GWHKEKGQAE PPQDPAVAAR KVQKADREKL RRDRLNDHFH DLANTLDPDR  60
PRNDKATILT DTIQMLKDLT AEVNRLKTEH KALSDESREL MQEKNELREE KASLKSDIEN  120
LNSQYQQRAR MMFPWTAIDH SVVMAPPPYS YPVPIPIPPA PVPIHPTLQP FPYFGNQNPP  180
HIPTPCSTYV PFSAPINAAL DLPSAQYASA SHVPAQKDCR SKSPPHRRIT DADRCSETHD  240
VATELELKMP GSSTQEESSS GGTKKVKHSG RKDRAVAEGS ASSRYSTSHG LQDSSNSVGD  300
IPKADS
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.V7BYP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015963616.10.0transcription factor bHLH121
RefseqXP_025651715.10.0transcription factor bHLH121-like
RefseqXP_025698367.10.0transcription factor bHLH121-like
SwissprotQ9LT234e-79BH121_ARATH; Transcription factor bHLH121
TrEMBLA0A444WUL70.0A0A444WUL7_ARAHY; Uncharacterized protein
STRINGXP_008241823.11e-132(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22823376
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.12e-72bHLH family protein
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Min JH, et al.
    Arabidopsis Basic Helix-Loop-Helix 34 (bHLH34) Is Involved in Glucose Signaling through Binding to a GAGA Cis-Element.
    Front Plant Sci, 2017. 8: p. 2100
    [PMID:29321786]