![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Aradu.UXN6T | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 304aa MW: 35117.6 Da PI: 6.9055 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168 | 3.1e-52 | 7 | 131 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 lppGfrFhP+deelv++yL+kk++++++ + +ike+d+yk++Pw+Lp+++ +ekewyfFs+rd+ky++g+r+nra+ sgyWkatg dk++ + + Aradu.UXN6T 7 LPPGFRFHPSDEELVNHYLCKKCAKQSIAA-PIIKEIDLYKFDPWQLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGK--PK 101 79*************************999.88***************7666789*************************************98..77 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 + g+kk Lvfy g+apkg+kt+W+mheyrl Aradu.UXN6T 102 ALGIKKALVFYAGKAPKGVKTNWIMHEYRL 131 8***************************98 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 9.68E-62 | 4 | 160 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 59.873 | 7 | 160 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.7E-27 | 8 | 131 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009611 | Biological Process | response to wounding | ||||
GO:0009788 | Biological Process | negative regulation of abscisic acid-activated signaling pathway | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 304 aa Download sequence Send to blast |
MQGGLELPPG FRFHPSDEEL VNHYLCKKCA KQSIAAPIIK EIDLYKFDPW QLPEMALYGE 60 KEWYFFSPRD RKYPNGSRPN RAAGSGYWKA TGADKPIGKP KALGIKKALV FYAGKAPKGV 120 KTNWIMHEYR LANVDRSAAN KLNNNNLRLD DWVLCRIYNK KGKIEKFNSA TTGLEQKLPK 180 FSPGEILHYD HEHEHETKPK IIHNFSNNEH QLYMDTSDSV PRLHTDSSCS DHAVSPDATC 240 DKEVESNPKW SNELDMQLFD TFDFQLNNYD NNLPMNDDDL FGNQFQMNQL MSFQDTFLFP 300 QKPF |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-81 | 5 | 166 | 13 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
---|---|---|---|
Motif ID | Method | Source | Motif file |
MP00121 | DAP | Transfer from AT1G01720 | Download |
![]() |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Aradu.UXN6T |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_015937478.1 | 0.0 | NAC domain-containing protein 2 | ||||
Refseq | XP_025615818.1 | 0.0 | NAC domain-containing protein 2 | ||||
Swissprot | Q39013 | 1e-119 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A445C180 | 0.0 | A0A445C180_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA04G38560.1 | 1e-155 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1258 | 34 | 108 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-117 | NAC family protein |