PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.UAJ8F
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Trihelix
Protein Properties Length: 426aa    MW: 48823.1 Da    PI: 4.6388
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.UAJ8FgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix392.2e-12197281286
     trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                  Wt++e+ +L++a  ++  + +r++l+   W ev++ + +  ++ r+ +qC+++++ l+k+ykk+           ss++ yf++++
  Aradu.UAJ8F 197 WTEHETFVLLDAWGDRFLQRERKSLRSDEWHEVADEVsKVSKIDRTDTQCRNRIDTLKKKYKKEIMKFPAM-GVGSSKWLYFERMN 281
                  *************************************666789********************99888876.566779*****997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138374.4E-20196283No hitNo description
PROSITE profilePS500906.156197254IPR017877Myb-like domain
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MNVELELNHI FHYLCKELDM RGSSYSQPVP NEYSQDNNDV DEEDEEQLGE GEDDGIDRRN  60
GFRISQKDAD DNDDGEGDTD GDGDGNNHDD NIDEANDDNR KIRNNFRLSQ KDNNDDEEGD  120
TDGDGNENDD NNNEGNDDND NSHGTKIEDG LEWHPKKQKL KSLVSAYELA PRVPAPSTVA  180
TSAPKPSSGG RNSLTDWTEH ETFVLLDAWG DRFLQRERKS LRSDEWHEVA DEVSKVSKID  240
RTDTQCRNRI DTLKKKYKKE IMKFPAMGVG SSKWLYFERM NKLMSPPPQQ TSLSCEMQSQ  300
KHSVINSRVN LNHPNGVDKT RNSPETTEST SEDGSIGARG KKRKKRCNDG ACSFRLLADS  360
IHKFSKIYEK IENSKRQQMV ELERMRMDLH KELEKQKRQI LERMQSKIWK LEQGDDENDD  420
SAENGM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1340344KKRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.UAJ8F
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015933647.10.0kinesin-related protein 4
TrEMBLA0A445CIJ71e-151A0A445CIJ7_ARAHY; Uncharacterized protein
STRINGGLYMA15G01730.11e-130(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24413480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.13e-60Trihelix family protein