PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.U974Q | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | NAC | ||||||||
Protein Properties | Length: 633aa MW: 71664 Da PI: 6.8148 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 179.5 | 9e-56 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 lppGfrFhPtdeelv +yLk+k++g+k++l e+i+evd+yk+ePwdLp + + +++ ewyfFs+rd+ky++g+r+nratk gyWkatgkd++v s + Aradu.U974Q 6 LPPGFRFHPTDEELVAYYLKRKINGRKIDL-EIIPEVDLYKCEPWDLPgRsLLPGKDLEWYFFSPRDRKYPNGSRTNRATKCGYWKATGKDRKVNS-Q 101 79****************************.99***************5334455777**************************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 +++vg+kktLv+y+grap+g++t Wvmheyrl Aradu.U974Q 102 SRAVGMKKTLVYYRGRAPHGSRTGWVMHEYRL 133 99****************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.06E-63 | 4 | 158 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 61.223 | 6 | 158 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.9E-30 | 7 | 133 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 633 aa Download sequence Send to blast |
MAPVSLPPGF RFHPTDEELV AYYLKRKING RKIDLEIIPE VDLYKCEPWD LPGRSLLPGK 60 DLEWYFFSPR DRKYPNGSRT NRATKCGYWK ATGKDRKVNS QSRAVGMKKT LVYYRGRAPH 120 GSRTGWVMHE YRLHERECET NAASGLQDAY ALCRVFKKAA VILPKVADHY AGNNIMMMTT 180 DSQGTPQVFD TMPWDHHIGH NGKCPHLSQD PFLNNLPSSS SSSFPHYGAL TYSPSKVDVA 240 LECARMQHSF SMPPLEVVEE FPNVGISELN IMTRGTTSMC GGSMNNNNES DILQQILSLA 300 NANVSSHEFT NQSNHSHTLL AGNNNANYSA PHHHEHDFAF NAGTSYTNHA VNDMNPMRYE 360 IQHQNLRTIE IGDLESEFKS FMEEQKTVPI EDISSFQTNI QENEVQESEL HNSNKEFSEA 420 DIDNFSMGFI NDGDPNENFI DEDDNIDYSN STSFEVLEET KVSHGMFVAT RRVADTFFHQ 480 IVPSQTIKVQ LNPVTIMGNN SSMEMLKNNQ ESLFKKLMMM KSPNTLASAI VFIFALLLTL 540 CVNLKGQVEN YWASRSDDDT INVKKKCCYG ANRSMKRMKQ VAHKIIWNQQ EKSWCVGIKS 600 GRGFSVVLKK IGIFLSISLA LCTMWVNHVT ISP |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3swm_A | 3e-57 | 1 | 160 | 15 | 170 | NAC domain-containing protein 19 |
3swm_B | 3e-57 | 1 | 160 | 15 | 170 | NAC domain-containing protein 19 |
3swm_C | 3e-57 | 1 | 160 | 15 | 170 | NAC domain-containing protein 19 |
3swm_D | 3e-57 | 1 | 160 | 15 | 170 | NAC domain-containing protein 19 |
3swp_A | 3e-57 | 1 | 160 | 15 | 170 | NAC domain-containing protein 19 |
3swp_B | 3e-57 | 1 | 160 | 15 | 170 | NAC domain-containing protein 19 |
3swp_C | 3e-57 | 1 | 160 | 15 | 170 | NAC domain-containing protein 19 |
3swp_D | 3e-57 | 1 | 160 | 15 | 170 | NAC domain-containing protein 19 |
3ulx_A | 2e-57 | 2 | 158 | 11 | 168 | Stress-induced transcription factor NAC1 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.U974Q |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015036 | 9e-42 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015956703.1 | 0.0 | NAC domain-containing protein 86-like isoform X2 | ||||
TrEMBL | A0A444ZVT1 | 0.0 | A0A444ZVT1_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA11G33210.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4421 | 34 | 60 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65910.1 | 1e-134 | NAC domain containing protein 28 |