PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.S9TW5
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 692aa    MW: 78029.8 Da    PI: 4.0662
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.S9TW5genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.65e-12637687148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHH.HHT..TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIar.tmg..kgRtlkqcksrwqkyl 48 
                      ++rW++ E+  l  av+q+G g+Wk+I + +m   + Rt+ ++k++w++++
      Aradu.S9TW5 637 KKRWSEFEEITLRAAVNQYGEGNWKLILStHMDvfEERTDVDLKDKWRNLK 687
                      68*************************761677**9*************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129415.013632691IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.1E-12634688IPR009057Homeodomain-like
SuperFamilySSF466891.48E-13634687IPR009057Homeodomain-like
SMARTSM007171.1E-6636689IPR001005SANT/Myb domain
PfamPF002491.6E-8637687IPR001005SANT/Myb domain
CDDcd116604.40E-16638688No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 692 aa     Download sequence    Send to blast
MGTEITALKR IYVYRCMKGS LLNLLIEELR HTALIHEDML HKLEVLEELD YRLGSPVSAS  60
FSAAYCAVAV ECTLKYLGTC SSRDVISNKS AYVNAINGIW RGHIPCMESS SSSGVGCRLY  120
TAELKRWRDD IEASLSDPKV LKRLESYNGR EDAIWKLKLY LLEASANLAP YFDEIALFAA  180
LYCNNCQTHV LDGDKQEPSA LAFLQRVNNR NVGELPIEKQ TAEAPKENLD TEATFGNQST  240
EPPNEENEIT EEARNENQTK EAPSEIQTTE SRVENMITEE APSEIQTEEA LIENQTSEAL  300
IENQITKEAS NENQTKEALI ENQISEALIE NMITEETPSE IQTEEALIEN QTSEALIEDM  360
ITEEAPSEIQ TEEASIENQT TEALIENQIT KEASDENQTK EALIENQTTE LIENQVTEEV  420
PNENRPEESP IENQIIEEAL DENQTKESPS ENQTTEALIE NQITIEASDE NQTKEALIEN  480
QTTELIENQV TEEVPNENPT EESPIENLII EEALDENQTK ESPSENQTTE ALIVNQITEE  540
APNENQTKEV PIHKIADALN ENQIAGAPTG NVGADTGLCD QHGFANASAE ECNESEQSLD  600
EGASDHVTKF HLPSPKKWKI SPLRKYEPQD IIIRRKKKRW SEFEEITLRA AVNQYGEGNW  660
KLILSTHMDV FEERTDVDLK DKWRNLKHHR AN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1633638RRKKKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.S9TW5
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015949459.10.0interaptin isoform X1
RefseqXP_025648042.10.0interaptin
TrEMBLA0A445EC460.0A0A445EC46_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3015222
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58340.21e-11MYB_related family protein