PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.S7YD6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | WRKY | ||||||||
Protein Properties | Length: 540aa MW: 59830.4 Da PI: 7.057 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 103.2 | 1.5e-32 | 196 | 253 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++C +kkkvers +++++ei+Y+g+Hnh+k Aradu.S7YD6 196 EDGYNWRKYGQKQVKGSENPRSYYKCTHPSCAMKKKVERSL-EGQITEIVYKGTHNHPK 253 7****************************************.***************85 PP | |||||||
2 | WRKY | 101.7 | 4.4e-32 | 367 | 425 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg++++rsYY+Ct +gC+v+k+ver+a+d k v++tYeg+Hnh+ Aradu.S7YD6 367 LDDGYRWRKYGQKVVKGNPNARSYYKCTAPGCSVRKHVERAATDIKSVITTYEGKHNHD 425 59********************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 7.5E-28 | 185 | 254 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 22.894 | 190 | 254 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.06E-24 | 191 | 254 | IPR003657 | WRKY domain |
SMART | SM00774 | 9.7E-35 | 195 | 253 | IPR003657 | WRKY domain |
Pfam | PF03106 | 7.3E-25 | 196 | 252 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 8.8E-36 | 352 | 427 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.44E-27 | 359 | 427 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 36.793 | 362 | 427 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.1E-35 | 367 | 426 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.7E-24 | 368 | 425 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009409 | Biological Process | response to cold | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009651 | Biological Process | response to salt stress | ||||
GO:0010120 | Biological Process | camalexin biosynthetic process | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0010508 | Biological Process | positive regulation of autophagy | ||||
GO:0042742 | Biological Process | defense response to bacterium | ||||
GO:0050832 | Biological Process | defense response to fungus | ||||
GO:0070370 | Biological Process | cellular heat acclimation | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 540 aa Download sequence Send to blast |
MKTSSFTDLL SNNYSNINMN MDDFGDALIQ NQESVPKFKS VTPPSLPLEN SQTSSYFPFT 60 SSTFSPTEFL NSSLFLSSPN IFASPTIEAF AGHSFNNKED EKNFSEFSFQ TQTKTASPSQ 120 AEPLKTQDMW KFTEPINQAE FSSQREATKS EYPSTQSFSS EMVATKPELQ SNSVPESGSF 180 NYANTSQSIK EQRRSEDGYN WRKYGQKQVK GSENPRSYYK CTHPSCAMKK KVERSLEGQI 240 TEIVYKGTHN HPKPQSTRRS SSSQQIIHQQ PSSSCTNSGI SDQSVVTLGN PQLDRVSMQE 300 DSSASMGEEE FEQTSPTSYS GGDADELGPD AKRWKGENEH DGHSAYGSRT VREPRVVVQT 360 TSEIDILDDG YRWRKYGQKV VKGNPNARSY YKCTAPGCSV RKHVERAATD IKSVITTYEG 420 KHNHDVPAAR GSAGYNMNRN SLNRNNSNAP AAPIRPAAVN GYSSAPNFTN SLYNPRLPAT 480 GTQESSSLDM LQGSGLFGYT SLGRSMGSYG NNSQLSDGVY IKAKDERKDD SFLESFLSKN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 2e-39 | 187 | 428 | 8 | 78 | Probable WRKY transcription factor 4 |
2lex_A | 2e-39 | 187 | 428 | 8 | 78 | Probable WRKY transcription factor 4 |
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Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00299 | DAP | Transfer from AT2G38470 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.S7YD6 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015971606.1 | 0.0 | probable WRKY transcription factor 33 | ||||
TrEMBL | A0A445CUL6 | 0.0 | A0A445CUL6_ARAHY; Uncharacterized protein | ||||
STRING | XP_007140176.1 | 0.0 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1077 | 34 | 114 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38470.1 | 7e-99 | WRKY DNA-binding protein 33 |