PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.S2L37
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HSF
Protein Properties Length: 85aa    MW: 9509.83 Da    PI: 4.9341
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.S2L37genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind29.22.4e-095484232
                  HHHHHHHHHCTGGGTTTSEESSSSSEEEES- CS
  HSF_DNA-bind  2 Flkklyeiledeelkeliswsengnsfvvld 32
                  Fl+k+y+i+ed+++++++ ws+ +nsfvv+d
   Aradu.S2L37 54 FLTKTYDIVEDPSTNHIVFWSKGNNSFVVWD 84
                  9*****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.102.0E-104785IPR011991Winged helix-turn-helix DNA-binding domain
SuperFamilySSF467851.63E-85085IPR011991Winged helix-turn-helix DNA-binding domain
PfamPF004476.9E-65485IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 85 aa     Download sequence    Send to blast
MNPVDHGVGK VMKKEYLGEG YCSFSYPMVV DIPPPPLPPP HPMEGLNESG HPPFLTKTYD  60
IVEDPSTNHI VFWSKGNNSF VVWDP
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE).
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.S2L37
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015941402.11e-40heat stress transcription factor A-6b-like
RefseqXP_025620243.11e-40heat stress transcription factor A-6b-like
SwissprotQ9LUH88e-22HFA6B_ARATH; Heat stress transcription factor A-6b
TrEMBLA0A0L9TZP41e-23A0A0L9TZP4_PHAAN; Uncharacterized protein
TrEMBLA0A0S3SMT11e-23A0A0S3SMT1_PHAAN; Uncharacterized protein
STRINGGLYMA10G38930.21e-23(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15923395
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.19e-21heat shock transcription factor A6B