PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.S283I
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 316aa    MW: 36284.4 Da    PI: 7.9022
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.S283IgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR145.72.2e-1452137291
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                   Y++YAk + Fs+r ++++k+ r ++i+++  +Cs+egk +++ +    +++t+++   +C  ++ ++  k  g w ++k++l+H+H ++p
  Aradu.S283I  52 IYKDYAKAADFSTRFRSTNKK-R-NKIKNQLITCSREGKWKSKISL---TEKTNPTAGLNCPTRIYIHILKnVGAWIISKVVLHHSHRCCP 137
                  7***************98887.4.4599*************99887...89999**************98879**************9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.0E-1152137IPR004330FAR1 DNA binding domain
PROSITE profilePS509668.58179215IPR007527Zinc finger, SWIM-type
PfamPF044346.3E-4180212IPR007527Zinc finger, SWIM-type
SMARTSM005754.0E-4190217IPR006564Zinc finger, PMZ-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MDDSTSDCQL NHSEVDFEFE SNEVLEPLSV VDEQLVPKVG MTLKILEDAA KIYKDYAKAA  60
DFSTRFRSTN KKRNKIKNQL ITCSREGKWK SKISLTEKTN PTAGLNCPTR IYIHILKNVG  120
AWIISKVVLH HSHRCCPTQA DMFKQHRELS MSVRRTIENS EEAVYEVGEQ VSSSIFNKFV  180
VTYDSVVAEV KCQCLLFESR GILCCHALSV LSFERVSQVS SRYILERWRK KVKRRHTHIK  240
SSHDEPLLEP RSKRFDELAF RSQNICEFAS ESEELTAILH CAYDNVMVEK ESMKAKRKGT  300
SSLSHEDANL ESVNEL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.S283I
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371780.0HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016196056.11e-105protein FAR1-RELATED SEQUENCE 1-like
TrEMBLA0A444Y6C30.0A0A444Y6C3_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22170.23e-14far-red elongated hypocotyls 3