PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.S13QQ
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NAC
Protein Properties Length: 344aa    MW: 39251.4 Da    PI: 6.8029
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.S13QQgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.11.4e-52111381128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 
                  lppGfrFhP+deel+v+yL++kv++++l++ ++i+e+d+yk++Pw+Lp+k+  +e+ewyfF++r++ky++g r+nra+ +gyWkatg+dk+++++ + 
  Aradu.S13QQ  11 LPPGFRFHPSDEELIVHYLRNKVTSSPLPA-SFIAEIDLYKFNPWELPSKALFGEEEWYFFTPRERKYPNGVRPNRAAGAGYWKATGTDKPIITSgGM 107
                  79****************************.89***************8777899**************************************99666 PP

          NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                  + +g+kk Lvfykgr pkg+ktdW+mheyrl
  Aradu.S13QQ 108 KSIGVKKALVFYKGRPPKGSKTDWIMHEYRL 138
                  77***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-639165IPR003441NAC domain
PROSITE profilePS5100561.36711165IPR003441NAC domain
PfamPF023653.2E-2712138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MDKDTSLEIH LPPGFRFHPS DEELIVHYLR NKVTSSPLPA SFIAEIDLYK FNPWELPSKA  60
LFGEEEWYFF TPRERKYPNG VRPNRAAGAG YWKATGTDKP IITSGGMKSI GVKKALVFYK  120
GRPPKGSKTD WIMHEYRLHD SLLSNSHKRG SMRLDEWVLC RVRQKTGSPR STLEDPSELI  180
YEPTKKIQQM NDENFNPELV KASIVHNEFP MLPYILASRS TLPNSIGVSS STGFVRNCDM  240
KQYGSVHEDN NLNVIGAQFL ASAMEGLYNN PLKRKFIEQE ENHLEYAPPN KKISLELGDD  300
VDNSDDKPSL VMDTNKGYNF GFFDQWNSII QPQELNSLAF MGYS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-7021656168Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.S13QQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1286383e-40AC128638.34 Medicago truncatula clone mth2-36h10, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015970038.10.0NAC transcription factor 29-like
RefseqXP_025605088.10.0NAC transcription factor 29
TrEMBLA0A445CIX30.0A0A445CIX3_ARAHY; Uncharacterized protein
STRINGGLYMA19G36421.11e-170(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24162981
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.14e-85NAC-like, activated by AP3/PI