PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.RSG9M
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 271aa    MW: 30986 Da    PI: 6.3114
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.RSG9MgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR165.91.1e-2073164191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  +fY +YAk  GF  rk+ ++  + ng+i +r++vC+k g+r+ ++ k ++++r++ra tr++Ck +++  +++ +gkw+v+ +++eHnH+l+p
  Aradu.RSG9M  73 EFYAKYAKCYGFMSRKDLKTV-DANGNINTRQLVCNKAGERHWKHLKrDNRQREHRAITRVNCKVRIRFIRHYrTGKWKVSVFQSEHNHPLCP 164
                  6***********999987655.59999**************9887664789999**************888877*****************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.8E-1873164IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MENDGKESYK DGMVDLSVEY ECSSDESDDM VDVTVDEAEA DIINAGGLEK LITDLTIEDI  60
WGLAFDTESQ VCEFYAKYAK CYGFMSRKDL KTVDANGNIN TRQLVCNKAG ERHWKHLKRD  120
NRQREHRAIT RVNCKVRIRF IRHYRTGKWK VSVFQSEHNH PLCPPKYRHL IAANRKLDEA  180
DKTQADSLRA CGVKTCHIMG YMFPVLTTCL ESFEKQAAEL YTRNIFKLVK DEIEVAGALN  240
VTECPNSGDI VEYSTSYLRL VDYRAPTSLG S
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.RSG9M
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015932831.11e-147protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445CHF41e-130A0A445CHF4_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1535229
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-20FAR1-related sequence 5