PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.Q7KDG
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 125aa    MW: 14570.8 Da    PI: 9.84
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.Q7KDGgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR161.62.3e-1928114190
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                  +fY++YAk+vGF ++++ +++  +++  +++  +C++e kr+++ +     ++t++ t+ +C a++ ++++k+g w ++k+ l+H+H++ 
  Aradu.Q7KDG  28 QFYQNYAKRVGFITKIRFTRRVGKDNVPKNQMITCNREEKRKSRVSP---IEKTNPRTNYNCPARISIRLNKEGLWIISKVCLDHSHPCD 114
                  6*************************9***************99877...999**********************************975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.4E-1628114IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    Send to blast
MESVLEEQNI EDVPKVGMCF GTIEDANQFY QNYAKRVGFI TKIRFTRRVG KDNVPKNQMI  60
TCNREEKRKS RVSPIEKTNP RTNYNCPARI SIRLNKEGLW IISKVCLDHS HPCDPEMAKL  120
LTRNK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.Q7KDG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015938509.11e-82protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_015961253.14e-82protein FAR-RED IMPAIRED RESPONSE 1-like
RefseqXP_016205073.16e-83protein FAR1-RELATED SEQUENCE 6-like
RefseqXP_025627791.16e-83protein FAR1-RELATED SEQUENCE 6-like
TrEMBLA0A445ETK82e-83A0A445ETK8_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.12e-15FAR1 family protein