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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.Q7KDG | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | FAR1 | ||||||||
Protein Properties | Length: 125aa MW: 14570.8 Da PI: 9.84 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 61.6 | 2.3e-19 | 28 | 114 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YAk+vGF ++++ +++ +++ +++ +C++e kr+++ + ++t++ t+ +C a++ ++++k+g w ++k+ l+H+H++ Aradu.Q7KDG 28 QFYQNYAKRVGFITKIRFTRRVGKDNVPKNQMITCNREEKRKSRVSP---IEKTNPRTNYNCPARISIRLNKEGLWIISKVCLDHSHPCD 114 6*************************9***************99877...999**********************************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 1.4E-16 | 28 | 114 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 125 aa Download sequence Send to blast |
MESVLEEQNI EDVPKVGMCF GTIEDANQFY QNYAKRVGFI TKIRFTRRVG KDNVPKNQMI 60 TCNREEKRKS RVSPIEKTNP RTNYNCPARI SIRLNKEGLW IISKVCLDHS HPCDPEMAKL 120 LTRNK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.Q7KDG |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015938509.1 | 1e-82 | protein FAR1-RELATED SEQUENCE 5-like | ||||
Refseq | XP_015961253.1 | 4e-82 | protein FAR-RED IMPAIRED RESPONSE 1-like | ||||
Refseq | XP_016205073.1 | 6e-83 | protein FAR1-RELATED SEQUENCE 6-like | ||||
Refseq | XP_025627791.1 | 6e-83 | protein FAR1-RELATED SEQUENCE 6-like | ||||
TrEMBL | A0A445ETK8 | 2e-83 | A0A445ETK8_ARAHY; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF21 | 14 | 477 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 2e-15 | FAR1 family protein |