PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.PYB81
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 379aa    MW: 43673.9 Da    PI: 6.3827
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.PYB81genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1842.3e-26153242290
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  fYn+Y++  GF  r+ k+ ++ + gei+++tfvC+++g+re++  +  +++r+++++tr+gC a++++k+++ +g+w+v+++++eHnHela
  Aradu.PYB81 153 FYNNYSRLKGFASRRGKTVRN-TAGEIVRYTFVCNRQGFREKKWLEkVDRKREHKVVTRCGCMAEMRIKRKDgSGRWYVSRFVEEHNHELA 242
                  9****************9998.8888***************997664678888999*********************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.5E-23153242IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    Send to blast
MEFLLLKSGG VVLENSGGVV LTALSTSLAV LVAMLGGSGE CVWFSVTWQV ETVRMLESCW  60
IVDESVIMAS SSKFWKDACM WNEPLADYWM EGNGGGSNPQ DTMFDTRVEE DAELSDWEGR  120
GALMLPGFLG LDGLRAENVL EMEFSSPQEA GGFYNNYSRL KGFASRRGKT VRNTAGEIVR  180
YTFVCNRQGF REKKWLEKVD RKREHKVVTR CGCMAEMRIK RKDGSGRWYV SRFVEEHNHE  240
LAYGKLVDYL RSHRKISEVE VAQLTSKREI GISIPKIYES FAAQLGGFNL VTFTKQDMCV  300
DFLRDTEDEL EFCSWYGTPV LQTEFVELEK SRWMMFTREM FLRFRDSLKR CVRVRICEIN  360
DTANPHAYTL QKYRRPEMN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1345350DSLKRC
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.PYB81
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015947585.10.0protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444YHK41e-172A0A444YHK4_ARAHY; Uncharacterized protein
TrEMBLA0A444Z0I71e-170A0A444Z0I7_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9185237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-23FAR1-related sequence 5