PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.PW6QG | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | WRKY | ||||||||
Protein Properties | Length: 364aa MW: 40725.1 Da PI: 8.6164 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 91.4 | 6.9e-29 | 290 | 348 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++ rKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYegeHnh+ Aradu.PW6QG 290 SDDFSGRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERAVDDPNMLVVTYEGEHNHT 348 699************************988****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF10533 | 2.5E-13 | 245 | 287 | IPR018872 | Zn-cluster domain |
Gene3D | G3DSA:2.20.25.80 | 2.0E-30 | 277 | 348 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 29.207 | 284 | 350 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.66E-24 | 285 | 349 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.4E-34 | 289 | 349 | IPR003657 | WRKY domain |
Pfam | PF03106 | 7.3E-24 | 291 | 347 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 364 aa Download sequence Send to blast |
MAVEFITGYD RGGDGDHSFV GNNDATTAAT VGEAACGGIQ RVEKLMDMIS EQKHEENDDY 60 SSLEKEEFAG VVVSILDNNK PRTRLLGHAR FRRAPSTTTL LPNNLQLQQM DHEKETINAT 120 RFFELSKEKD GFSPQQRSKE EQVSSSAFKL YCPTSILPPL PQRKSNNYHD YPSRFSHNQK 180 NNNVEANNGS STSIDFSTTN SYTYLSTLTN NIDDDHSLQI QRVSLNKGSS SYMQKPPLSN 240 SSLNKRKCNS LDNNVQSSSS KCHCYKKRKS KLKRVIRVAA ISSKTADIPS DDFSGRKYGQ 300 KPIKGSPHPR GYYKCSSVRG CPARKHVERA VDDPNMLVVT YEGEHNHTLT HDDYANDAVI 360 LQSS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 3e-19 | 277 | 349 | 2 | 73 | WRKY transcription factor 1 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.PW6QG |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015972394.1 | 0.0 | probable WRKY transcription factor 7 isoform X1 | ||||
TrEMBL | A0A444YWA5 | 0.0 | A0A444YWA5_ARAHY; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF30000 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24240.1 | 5e-66 | WRKY DNA-binding protein 7 |