PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Aradu.P5ZA9

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 498aa MW: 56622.1 Da PI: 7.2475

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.P5ZA9	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	45.1	3.4e-14	126	201	1	72
FAR1 1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek 72 ++Yne++ + GFsv++sk ++ +g+i+++ fvCs+eg+r+ ++ + +++++ +r+ tr+ C+a++kv+ ++ Aradu.P5ZA9 126 DYYNEFGCMKGFSVKRSKVGRRtkqGAEGKIIWQIFVCSREGERDGKHMHrEDRKKDPRPITRCRCEARIKVHIDD 201 69***********998766633367889**********99988846677789************9775 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	5.5E-12	126	200	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence Send to blast
MVRKQRSRSD YLEVQIREGN GPPRATKFTS TLCQCRLGFY RPIISGEACA EIDFNWGDAD 60 DGMSGETVPE EEVEAMDSSV ADADIDAEAA VRIVDGIGSF GAIEFSSLTA KDVLTTEFTS 120 LQAAYDYYNE FGCMKGFSVK RSKVGRRTKQ GAEGKIIWQI FVCSREGERD GKHMHREDRK 180 KDPRPITRCR CEARIKVHID DASGAVKEGD LHQINSIRKS GLQVPTIFRA FANQSGGFET 240 VGFETIWTDS VVDHGLEDHP WIVDMYSKKH SWSNAHIREK FFAGLKTTSR RRELVANYKS 300 TYGEPVVKTK LEAIEQFAAT VYTREVFELF QEVLMLASNI RVVSTKRTSV GVLFEVAMYC 360 KQISWAVSWA EEDDEFSCFC QRMESFGLSC VHMRAKQSRA PCDGTRVGEI SDAAYMSMHT 420 TMLDDYRELV SLSCQFFEDY VDVKTWLAKE HQSLRDKHRQ RLDVAEEASR VSLRDPMRAR 480 YKGCGRRVVT SRGKFCRV

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence Send to blast

MVRKQRSRSD YLEVQIREGN GPPRATKFTS TLCQCRLGFY RPIISGEACA EIDFNWGDAD  60
DGMSGETVPE EEVEAMDSSV ADADIDAEAA VRIVDGIGSF GAIEFSSLTA KDVLTTEFTS  120
LQAAYDYYNE FGCMKGFSVK RSKVGRRTKQ GAEGKIIWQI FVCSREGERD GKHMHREDRK  180
KDPRPITRCR CEARIKVHID DASGAVKEGD LHQINSIRKS GLQVPTIFRA FANQSGGFET  240
VGFETIWTDS VVDHGLEDHP WIVDMYSKKH SWSNAHIREK FFAGLKTTSR RRELVANYKS  300
TYGEPVVKTK LEAIEQFAAT VYTREVFELF QEVLMLASNI RVVSTKRTSV GVLFEVAMYC  360
KQISWAVSWA EEDDEFSCFC QRMESFGLSC VHMRAKQSRA PCDGTRVGEI SDAAYMSMHT  420
TMLDDYRELV SLSCQFFEDY VDVKTWLAKE HQSLRDKHRQ RLDVAEEASR VSLRDPMRAR  480
YKGCGRRVVT SRGKFCRV

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.P5ZA9

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015934909.1	1e-147	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445D9E8	1e-154	A0A445D9E8_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF13819	2	5

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	2e-12	FAR1-related sequence 7