PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.P5ZA9
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 498aa    MW: 56622.1 Da    PI: 7.2475
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.P5ZA9genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR145.13.4e-14126201172
         FAR1   1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek 72 
                  ++Yne++ + GFsv++sk  ++     +g+i+++ fvCs+eg+r+ ++ + +++++ +r+ tr+ C+a++kv+ ++
  Aradu.P5ZA9 126 DYYNEFGCMKGFSVKRSKVGRRtkqGAEGKIIWQIFVCSREGERDGKHMHrEDRKKDPRPITRCRCEARIKVHIDD 201
                  69*************998766633367889**************99988846677789**************9775 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031015.5E-12126200IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 498 aa     Download sequence    Send to blast
MVRKQRSRSD YLEVQIREGN GPPRATKFTS TLCQCRLGFY RPIISGEACA EIDFNWGDAD  60
DGMSGETVPE EEVEAMDSSV ADADIDAEAA VRIVDGIGSF GAIEFSSLTA KDVLTTEFTS  120
LQAAYDYYNE FGCMKGFSVK RSKVGRRTKQ GAEGKIIWQI FVCSREGERD GKHMHREDRK  180
KDPRPITRCR CEARIKVHID DASGAVKEGD LHQINSIRKS GLQVPTIFRA FANQSGGFET  240
VGFETIWTDS VVDHGLEDHP WIVDMYSKKH SWSNAHIREK FFAGLKTTSR RRELVANYKS  300
TYGEPVVKTK LEAIEQFAAT VYTREVFELF QEVLMLASNI RVVSTKRTSV GVLFEVAMYC  360
KQISWAVSWA EEDDEFSCFC QRMESFGLSC VHMRAKQSRA PCDGTRVGEI SDAAYMSMHT  420
TMLDDYRELV SLSCQFFEDY VDVKTWLAKE HQSLRDKHRQ RLDVAEEASR VSLRDPMRAR  480
YKGCGRRVVT SRGKFCRV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.P5ZA9
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015934909.11e-147protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445D9E81e-154A0A445D9E8_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1381925
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.12e-12FAR1-related sequence 7