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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.NTD67 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | WRKY | ||||||||
Protein Properties | Length: 512aa MW: 55209.4 Da PI: 8.5928 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 79 | 5.3e-25 | 199 | 255 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK+vk+ + +rsYYrCt+++C +kk +e++++ ++v++++Y+++H h+ Aradu.NTD67 199 SDGYSWRKYGQKQVKSPTGSRSYYRCTHSECAAKK-IECNDDAGRVIDVVYKSQHSHD 255 8******************************9988.*********************7 PP | |||||||
2 | WRKY | 97.4 | 9.5e-31 | 374 | 430 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++e++ ++ ++v+itY+g H+h+ Aradu.NTD67 374 DGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSNAVIITYKGVHDHD 430 9*******************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 4.2E-20 | 195 | 257 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.16E-19 | 196 | 257 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.3E-23 | 198 | 256 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 18.406 | 199 | 257 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.1E-18 | 200 | 255 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 1.1E-31 | 357 | 432 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 31.904 | 367 | 432 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.66E-27 | 368 | 432 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.7E-35 | 372 | 431 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.5E-23 | 374 | 429 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 512 aa Download sequence Send to blast |
MAEQPSSAEA VTEGAPELLP KEKDSEGGEG GNEQGQQGKA SEGEERASES PCETDKPPKS 60 SDKPPKGSNS GTLAAESPVV NNRSDELQGS PATPNMDVKA ESKETDGPRE KETIASEAVQ 120 PPPTQIENQP QVSACSTPLS ELSPTSVTQS LSSVPSQIAP KQKMPPLKIN NVHVPQLDKK 180 IPSGGKHVSC GSVARVSVSD GYSWRKYGQK QVKSPTGSRS YYRCTHSECA AKKIECNDDA 240 GRVIDVVYKS QHSHDPPHKP NSTRESKLVS SSEPPNVENK VSQQLSIRGL KNSDPSPSKE 300 TLQDAPRTAD KKRPNSSNLS DNGKVILKEE HVNEPEPKKR MKKDDLADLD SPVKSGKKSR 360 FVVHAEGDVG ISGDGYRWRK YGQKMVKGNP HPRNYYRCTS AGCPVRKHIE TAVDNSNAVI 420 ITYKGVHDHD MPVPKKRHGP PSAPLVAAAA PASMNNSQSK KKPDSPKKQN KSTQWSVDTE 480 GELSGEAMDL GGEKAMESAR TLLSIGFEIK PC |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 1e-26 | 359 | 432 | 1 | 74 | WRKY transcription factor 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.NTD67 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015932904.1 | 0.0 | probable WRKY transcription factor 32 isoform X2 | ||||
Refseq | XP_025607555.1 | 0.0 | probable WRKY transcription factor 32 isoform X2 | ||||
Swissprot | P59583 | 1e-130 | WRK32_ARATH; Probable WRKY transcription factor 32 | ||||
TrEMBL | A0A445EN89 | 0.0 | A0A445EN89_ARAHY; Uncharacterized protein | ||||
STRING | XP_007154886.1 | 0.0 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5198 | 34 | 56 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G30935.1 | 1e-121 | WRKY DNA-binding protein 32 |