PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.NEU1C | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | NAC | ||||||||
Protein Properties | Length: 255aa MW: 29566.9 Da PI: 5.3874 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 126.5 | 2.1e-39 | 7 | 129 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 lp+G+rF+Pt+ee++ +yL++k g++ e++++i++vd+++++PwdLp + kvk++++ew+fF + ky ++kr nr+t+ gyWk tgk++ + Aradu.NEU1C 7 LPVGYRFRPTEEEILIHYLNNKHLGNDAEIKNTISQVDLCNFDPWDLPeQsKVKSDDQEWFFFNEL--KYMKNKRCNRKTNMGYWKITGKERIGT--- 99 799***************************999**************95258899999*****886..778899****************76544... PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 ++++g+k+tLvfy ++p+ +kt+Wv+hey++ Aradu.NEU1C 100 DSVIGTKRTLVFY--ERPHNVKTNWVLHEYHA 129 589**********..688889*********95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.14E-40 | 4 | 147 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 40.608 | 7 | 149 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.1E-22 | 8 | 128 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence Send to blast |
MAETRVLPVG YRFRPTEEEI LIHYLNNKHL GNDAEIKNTI SQVDLCNFDP WDLPEQSKVK 60 SDDQEWFFFN ELKYMKNKRC NRKTNMGYWK ITGKERIGTD SVIGTKRTLV FYERPHNVKT 120 NWVLHEYHAF DQKVGSCQSN IVLSRVIMNA EKREQKLKTK ASNIVEEEEA CVSSERQQPQ 180 VIDYEILSSG QQSSVAHSGN ENNNAAEATW RQDADMNIEY FWNLLFSSID ADPHAEFLNS 240 VLAGDDQLYV DSGHH |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 4e-27 | 7 | 146 | 17 | 162 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 4e-27 | 7 | 146 | 17 | 162 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 4e-27 | 7 | 146 | 17 | 162 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 4e-27 | 7 | 146 | 17 | 162 | NO APICAL MERISTEM PROTEIN |
3swm_A | 4e-27 | 7 | 146 | 20 | 165 | NAC domain-containing protein 19 |
3swm_B | 4e-27 | 7 | 146 | 20 | 165 | NAC domain-containing protein 19 |
3swm_C | 4e-27 | 7 | 146 | 20 | 165 | NAC domain-containing protein 19 |
3swm_D | 4e-27 | 7 | 146 | 20 | 165 | NAC domain-containing protein 19 |
3swp_A | 4e-27 | 7 | 146 | 20 | 165 | NAC domain-containing protein 19 |
3swp_B | 4e-27 | 7 | 146 | 20 | 165 | NAC domain-containing protein 19 |
3swp_C | 4e-27 | 7 | 146 | 20 | 165 | NAC domain-containing protein 19 |
3swp_D | 4e-27 | 7 | 146 | 20 | 165 | NAC domain-containing protein 19 |
3ulx_A | 5e-27 | 7 | 128 | 15 | 139 | Stress-induced transcription factor NAC1 |
4dul_A | 4e-27 | 7 | 146 | 17 | 162 | NAC domain-containing protein 19 |
4dul_B | 4e-27 | 7 | 146 | 17 | 162 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP). {ECO:0000250|UniProtKB:Q949N0}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.NEU1C |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By cold, heat and drought stresses. {ECO:0000269|PubMed:17158162}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020990492.1 | 0.0 | NAC domain-containing protein 14-like isoform X1 | ||||
Swissprot | B5X570 | 2e-38 | NAC14_ARATH; NAC domain-containing protein 14 | ||||
TrEMBL | A0A445EHL3 | 1e-177 | A0A445EHL3_ARAHY; Uncharacterized protein | ||||
STRING | AES84627 | 1e-47 | (Medicago truncatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2065 | 25 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.1 | 6e-41 | NAC 014 |