 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Aradu.N6FMH |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
| Family |
Trihelix |
| Protein Properties |
Length: 460aa MW: 52992.8 Da PI: 7.6271 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aradu.N6FMH | genome | NCGR_PGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 39.2 | 1.8e-12 | 21 | 68 | 37 | 86 |
trihelix 37 kmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
k+ e g++rs+k+Ckek+en+ k++k++keg+ ++++++ t+++fdql+
Aradu.N6FMH 21 KLGEIGYKRSAKKCKEKFENVYKYHKRTKEGRTGKSEGK--TYKFFDQLQ 68
67899****************************975544..6******98 PP
|
| 2 | trihelix | 101.9 | 5.1e-32 | 280 | 365 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87
rW+k ev+aLi++r+++++++ ++ k+plWe++s m++ g++rs+k+Ckekwen+nk++kk+ke++k+r e+s+tcpyf++lea
Aradu.N6FMH 280 RWPKGEVHALIRLRTSLDSKYMENGPKAPLWEDISGGMQRLGYNRSAKRCKEKWENINKYFKKVKESNKQR-REDSKTCPYFHELEA 365
8*********************************************************************8.78999********85 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0010192 | Biological Process | mucilage biosynthetic process |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 460 aa
Download sequence Send
to blast |
MSFGGNRWPR QETLALLKIR KLGEIGYKRS AKKCKEKFEN VYKYHKRTKE GRTGKSEGKT 60
YKFFDQLQAL ENHNQFNTHP PPKSSQPLLP ANPTLVYSSI LPSTTVTAAT TNNISSTTFA 120
PHSFPNNNSM NLFSSPSSSP TSPSSSTASD EGLEERYKKK RKWKDYFRKL TRQVLAKQEE 180
MQNRFLEAID RRERERVAQE EAWRLQEMSR IANEHDVLVQ ERSTAAAKDA AVIALLHKLS 240
GHETQSPQTQ IQIQKQETIK AKNSSSSEIV ERMSCSSSSR WPKGEVHALI RLRTSLDSKY 300
MENGPKAPLW EDISGGMQRL GYNRSAKRCK EKWENINKYF KKVKESNKQR REDSKTCPYF 360
HELEALYKDK ISNNNNNTFG SFQNNMEPLM VQPEQQWRPP PEPNKDNNNA SNEEEEEEYD 420
DDGVEEEEEE EEGDSVGEEE EGLNRYQIVT NKVSSVDTVE
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor that binds specific DNA sequence. {ECO:0000250}. |
