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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.N5DK2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | bHLH | ||||||||
Protein Properties | Length: 173aa MW: 19805.7 Da PI: 7.5821 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 19.2 | 2.1e-06 | 1 | 34 | 4 | 40 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC......TTS-STC CS HLH 4 ahnerErrRRdriNsafeeLrellPkas...kapskKlsK 40 +h e Er+RR+++ + ++Lr+llP + + +K Aradu.N5DK2 1 MHRETERQRRQEMGKLCATLRSLLPLEYiklQ------NK 34 599**********************9743442......33 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 10.017 | 1 | 48 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 5.82E-6 | 2 | 49 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 5.9E-4 | 2 | 34 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence Send to blast |
MHRETERQRR QEMGKLCATL RSLLPLEYIK LQNKVKKLQA KRDELKKHFS DLNNNAIHDD 60 EDESILHLPP YVVVHPLQGV GVEIICSYSF KKCLCPLSRL LHILIGEGLN IINTISTKKN 120 GRFIHTIQSE DPNISSSADY SELQRKLTEA ISSSSSLPET LIRPEENINI SEY |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.N5DK2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025701888.1 | 1e-111 | transcription factor bHLH36 | ||||
TrEMBL | A0A445CZN9 | 1e-110 | A0A445CZN9_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA09G27610.1 | 4e-57 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF792 | 33 | 125 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51790.1 | 2e-24 | bHLH family protein |