![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Aradu.MF9WN | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 168aa MW: 19394.8 Da PI: 11.046 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 29.8 | 1.3e-09 | 66 | 112 | 5 | 51 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 ++ rrk++NRe+ArrsR RK+ +e+L++ k+ eN++L ++l+ Aradu.MF9WN 66 RKRRRKISNRESARRSRMRKQRHLENLRNQLKASRVENRELNNRLQL 112 5789**********************************999977765 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.5E-10 | 62 | 126 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.197 | 64 | 127 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.45E-9 | 66 | 116 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 3.2E-7 | 66 | 115 | No hit | No description |
CDD | cd14702 | 2.00E-15 | 67 | 118 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 69 | 84 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 168 aa Download sequence Send to blast |
MLSAISASDA LLGNPFASSA FDGGFPPWDC TDFFFAAINT SSSGSDDPNE NNAKEKPGSE 60 AVMNERKRRR KISNRESARR SRMRKQRHLE NLRNQLKASR VENRELNNRL QLMVHHFNRV 120 RTENDWLRSE RTLLRQKLSY MTQILLFQQL QQPSLSSSAW PCNNVTPQ |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 65 | 69 | RKRRR |
2 | 78 | 85 | RRSRMRKQ |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Aradu.MF9WN |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_015963702.1 | 1e-121 | basic leucine zipper 43 | ||||
TrEMBL | A0A444WU64 | 1e-119 | A0A444WU64_ARAHY; Uncharacterized protein | ||||
STRING | XP_004509055.1 | 2e-60 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5435 | 32 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G49760.1 | 6e-23 | basic leucine-zipper 5 |