 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Aradu.M5IDE |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
| Family |
LSD |
| Protein Properties |
Length: 148aa MW: 15461.9 Da PI: 7.7276 |
| Description |
LSD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aradu.M5IDE | genome | NCGR_PGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-LSD1 | 46.1 | 7.8e-15 | 30 | 54 | 1 | 25 |
zf-LSD1 1 CggCrtlLsYPrGApsVRCalCdtV 25
C+gCr+lL+YP GA+sV+Ca+C++V
Aradu.M5IDE 30 CSGCRNLLMYPVGATSVCCAVCNAV 54
************************9 PP
|
| 2 | zf-LSD1 | 46.8 | 5e-15 | 69 | 93 | 1 | 25 |
zf-LSD1 1 CggCrtlLsYPrGApsVRCalCdtV 25
CggC+tlL+Y rGA+sV+C++C+tV
Aradu.M5IDE 69 CGGCHTLLMYIRGATSVQCSCCHTV 93
************************9 PP
|
| 3 | zf-LSD1 | 38.4 | 2.1e-12 | 107 | 131 | 1 | 25 |
zf-LSD1 1 CggCrtlLsYPrGApsVRCalCdtV 25
Cg+Cr lL+Y +GA+sV+Ca+C +V
Aradu.M5IDE 107 CGNCRMLLMYQYGARSVKCAVCSFV 131
**********************988 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009814 | Biological Process | defense response, incompatible interaction |
| GO:0034051 | Biological Process | negative regulation of plant-type hypersensitive response |
| GO:0034052 | Biological Process | positive regulation of plant-type hypersensitive response |
| GO:0045595 | Biological Process | regulation of cell differentiation |
| GO:2000121 | Biological Process | regulation of removal of superoxide radicals |
| Sequence ? help Back to Top |
| Protein Sequence Length: 148 aa
Download sequence Send
to blast |
MPPVPLAPYP TPSVPYTTPP SNGAQSQLVC SGCRNLLMYP VGATSVCCAV CNAVTAVPPP 60
GTEMAQLICG GCHTLLMYIR GATSVQCSCC HTVNLALEAN QVAHVNCGNC RMLLMYQYGA 120
RSVKCAVCSF VTSVGDSSTS TTEQKFST
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Positive regulator of reactive oxygen-induced cell death. May be involved in the repression of the copper/zinc superoxide dismutase CSD1 and CSD2 that detoxify accumulating superoxide before the reactive oxygen species (ROS) can trigger a cell death cascade. LSD1 and LOL1 have antagonistic effects on CSD1 and CSD2 accumulation to regulate oxidative stress-induced cell death. {ECO:0000269|PubMed:12732715}. |
