PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.LZ0D8
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NAC
Protein Properties Length: 351aa    MW: 40289.8 Da    PI: 8.5704
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.LZ0D8genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM160.37.8e-50281563128
          NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk...k 96 
                  pGfrFhPtdeelv++yLk+k+++k++++ e ik++diyk++PwdLpk + +++eke yfF+kr +ky+++ r+nr+t+sg+Wkatg dk+v+s+   +
  Aradu.LZ0D8  28 PGFRFHPTDEELVSFYLKRKLDKKPISI-ELIKQIDIYKYDPWDLPKaSGSGGEKEGYFFCKRGRKYRNSIRPNRVTSSGFWKATGIDKPVYSHggeG 124
                  9***************************.89***************52445577799************************************96555 PP

          NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                  +  +glkktLv+y+g+a kg+ktdW+mhe+rl
  Aradu.LZ0D8 125 SDCIGLKKTLVYYRGSAGKGTKTDWMMHEFRL 156
                  555***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.09E-5226197IPR003441NAC domain
PROSITE profilePS5100551.87926197IPR003441NAC domain
PfamPF023655.7E-2528156IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005992Biological Processtrehalose biosynthetic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006561Biological Processproline biosynthetic process
GO:0009718Biological Processanthocyanin-containing compound biosynthetic process
GO:0010120Biological Processcamalexin biosynthetic process
GO:0042538Biological Processhyperosmotic salinity response
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    Send to blast
MGVNEDLMMK DDSYASSVME EEDDVPLPGF RFHPTDEELV SFYLKRKLDK KPISIELIKQ  60
IDIYKYDPWD LPKASGSGGE KEGYFFCKRG RKYRNSIRPN RVTSSGFWKA TGIDKPVYSH  120
GGEGSDCIGL KKTLVYYRGS AGKGTKTDWM MHEFRLPSAT TENKTSLLAN NKNNNNINNA  180
DVAQEAEIWT LCRIFKRNVS QRKHTADLRS HLVTANSNKH KTTRTHVVQS NNNNINQHQE  240
SYINFGATII GHHHYHHQNE QKPVTNYTAC NNNTDQIQRN NSNHHHHHQL NYHPSSAVAT  300
TVPQQQQQQY HHHHQLMTAP ASNMWINPSA MNDLFAFDDN WDELGSVLKF A
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-462820319171NO APICAL MERISTEM PROTEIN
1ut4_B7e-462820319171NO APICAL MERISTEM PROTEIN
1ut7_A7e-462820319171NO APICAL MERISTEM PROTEIN
1ut7_B7e-462820319171NO APICAL MERISTEM PROTEIN
3swm_A9e-462820322174NAC domain-containing protein 19
3swm_B9e-462820322174NAC domain-containing protein 19
3swm_C9e-462820322174NAC domain-containing protein 19
3swm_D9e-462820322174NAC domain-containing protein 19
3swp_A9e-462820322174NAC domain-containing protein 19
3swp_B9e-462820322174NAC domain-containing protein 19
3swp_C9e-462820322174NAC domain-containing protein 19
3swp_D9e-462820322174NAC domain-containing protein 19
4dul_A7e-462820319171NAC domain-containing protein 19
4dul_B7e-462820319171NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269|PubMed:22345491}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00310DAPTransfer from AT2G43000Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.LZ0D8
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269|PubMed:22345491}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025610552.10.0putative NAC domain-containing protein 94 isoform X1
SwissprotQ9SK558e-86NAC42_ARATH; Transcription factor JUNGBRUNNEN 1
TrEMBLA0A445CGZ10.0A0A445CGZ1_ARAHY; Uncharacterized protein
STRINGGLYMA15G40950.11e-143(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101334112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.13e-87NAC domain containing protein 42
Publications ? help Back to Top
  1. Shahnejat-Bushehri S,Nobmann B,Devi Allu A,Balazadeh S
    JUB1 suppresses Pseudomonas syringae-induced defense responses through accumulation of DELLA proteins.
    Plant Signal Behav, 2016. 11(6): p. e1181245
    [PMID:27159137]
  2. Shahnejat-Bushehri S,Tarkowska D,Sakuraba Y,Balazadeh S
    Arabidopsis NAC transcription factor JUB1 regulates GA/BR metabolism and signalling.
    Nat Plants, 2016. 2: p. 16013
    [PMID:27249348]
  3. Shahnejat-Bushehri S, et al.
    Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato.
    Front Plant Sci, 2017. 8: p. 214
    [PMID:28326087]
  4. Sakuraba Y,Bülbül S,Piao W,Choi G,Paek NC
    Arabidopsis EARLY FLOWERING3 increases salt tolerance by suppressing salt stress response pathways.
    Plant J., 2017. 92(6): p. 1106-1120
    [PMID:29032592]
  5. Ebrahimian-Motlagh S, et al.
    JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13.
    Front Plant Sci, 2017. 8: p. 2118
    [PMID:29326734]