PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.L75IP
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family CPP
Protein Properties Length: 911aa    MW: 99164.9 Da    PI: 6.4612
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.L75IPgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR47.14.9e-15492530341
          TCR   3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 
                  +k+CnCkkskClk+YC+Cfaag +C+++C+C++C N+ e
  Aradu.L75IP 492 CKRCNCKKSKCLKLYCDCFAAGIYCADDCSCQSCLNRPE 530
                  89**********************************876 PP
2TCR49.48.8e-16578616139
          TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 
                  ++k+gCnCk+s C+kkYCeC++ag+ Cs+ C+Ce+CkN 
  Aradu.L75IP 578 RHKRGCNCKRSMCQKKYCECYQAGVGCSSGCRCEGCKNV 616
                  589***********************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011142.8E-14490531IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163434.623491618IPR005172CRC domain
PfamPF036382.2E-11493528IPR005172CRC domain
SMARTSM011147.8E-16578619IPR033467Tesmin/TSO1-like CXC domain
PfamPF036384.2E-11580615IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 911 aa     Download sequence    Send to blast
MIMESPEPSK NNATSSASTI NAVAINDSPQ VQESPFFRFV NNLSPIKQPA KASHVAQGFV  60
GLNSPPLVFT SPRISCHRET HLLERPSGAQ SSSRSESQSD NRGKLIEAPG DSAKSTAELP  120
LAGEFITETV KDFDVKNDAT TQHCSPPPSV DKYLVDPVDI DQMYSVNPDE KQSNDTESSL  180
SNLAQSKKSI SEVDSKDDPC DKADKPLILL EKVDKAQTGP AYVEGHDQVT EEKNDVLMAL  240
HKRMKDDNDC TSQLLPEQTL QDVKDWEDCD EMVSTSHVGA ENVSQDASEV TLKHHGLRRR  300
CLQFEEAASN ARGSDKSCMK SNAAPIKIKM VKLSEPGTSS LFPQRCSGNS TVTCPKPSGI  360
GLHLNSIVNA MPPGCAATTG IRSSDCLQGK KSALISINKV ENMKGRLTSS NIDGQSLIDS  420
GNESQANISS LPVDSFISGS HSPTEPVAIC PESLHDKRKL SPTGDGYPEE SKQPSPSKKK  480
KRASSNNDDN GCKRCNCKKS KCLKLYCDCF AAGIYCADDC SCQSCLNRPE YENKVIETRK  540
QIESRNPLAF LPKIVPQSTD RPSNNMEDAI LMTPSSARHK RGCNCKRSMC QKKYCECYQA  600
GVGCSSGCRC EGCKNVYGTK EDYVARDHVF NKERMGSRIE NEPDGAFLNK LEMVASKSDL  660
FHVSPITPSL QCSDQGKEAA KFGLHSGQHL PSSETNVDML PSSANYNKSL ENSQNVLANL  720
ETDEMLETAS YDWQVDCSDV MDQSSPCDLV ANILQDTPLS NPESMSSASL FTSSTKECGN  780
IPLSQSQGRI RLISGSSLRW RGSPNTPRAR LGVKHLQSLD SESRLFDIME DETPDVLKEG  840
LTPTKSVKAN SPNQKRVSPP HSRLRGLGSS SSGGFRTGRK FILKSVPSFP PLTPCVESRD  900
NSSEDLGNNA K
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A1e-1849561614121Protein lin-54 homolog
5fd3_B1e-1849561614121Protein lin-54 homolog
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.L75IP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015972004.10.0CRC domain-containing protein TSO1
TrEMBLA0A444YUY50.0A0A444YUY5_ARAHY; Uncharacterized protein
STRINGGLYMA17G31399.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF85652841
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22760.14e-59Tesmin/TSO1-like CXC domain-containing protein