PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.K3GZ3
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB
Protein Properties Length: 429aa    MW: 46215.9 Da    PI: 5.8089
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.K3GZ3genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.31.6e-1760105147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +g+W++eEd  l ++v+q+G ++W+ Iar ++ gR++k+c++rw + 
      Aradu.K3GZ3  60 KGPWSPEEDAVLSRLVAQFGARNWSMIARGVP-GRSGKSCRLRWCNQ 105
                      79******************************.***********985 PP
2Myb_DNA-binding55.41.4e-17112156147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r+++T+eEd ++v a++ +G++ W++Iar ++ gRt++ +k++w++ 
      Aradu.K3GZ3 112 RKPFTEEEDCIIVSAHAIHGNK-WAAIARLLP-GRTDNAIKNHWNST 156
                      789*******************.*********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129420.30855106IPR017930Myb domain
SuperFamilySSF466891.2E-3057153IPR009057Homeodomain-like
SMARTSM007171.1E-1459108IPR001005SANT/Myb domain
PfamPF002497.6E-1660105IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.2E-2561113IPR009057Homeodomain-like
CDDcd001673.35E-1462104No hitNo description
PROSITE profilePS5129424.935107161IPR017930Myb domain
SMARTSM007174.1E-17111159IPR001005SANT/Myb domain
PfamPF002495.2E-15112156IPR001005SANT/Myb domain
CDDcd001676.43E-13114157No hitNo description
Gene3DG3DSA:1.10.10.603.6E-23114160IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0009733Biological Processresponse to auxin
GO:0009737Biological Processresponse to abscisic acid
GO:0009739Biological Processresponse to gibberellin
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MTEEEDRASV EPIAGNGVSL PQELVGGGGT AETEPAGRDA EVTVVGDGNS GGGAAAGKVK  60
GPWSPEEDAV LSRLVAQFGA RNWSMIARGV PGRSGKSCRL RWCNQLDPCV KRKPFTEEED  120
CIIVSAHAIH GNKWAAIARL LPGRTDNAIK NHWNSTLKRR CMEQGRYVPP RVEAMEDGSI  180
EKTKASSEET LSVEDMNSYP TQVRNVVMNT EIKQHEDKPP TTRNDVSEVE QNPTLHRPVA  240
RTSAFSVYNP TSRPTNGSSS SKILPLQSPL FQLPKAVEGA CKLFDGIECE PMVPLQCGHG  300
CCAPESGGSH SHGSSLLGPE FVDYLDSPPF LSHELISIAT DLNNMAWIKS GLENHGGAKV  360
TDNAANLTGS QGAATVSQTG FLGQGQKNDF MQMQYEEGPG KVMFLGTNTM KEMLSSKMPR  420
QHFAMPAEV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A6e-39591606107B-MYB
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.K3GZ3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015931457.10.0transcription factor MYB1
TrEMBLA0A445C5Q20.0A0A445C5Q2_ARAHY; Uncharacterized protein
STRINGGLYMA14G06870.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39863362
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55730.11e-92myb domain protein 109