PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.K2UJH
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family NAC
Protein Properties Length: 681aa    MW: 75407.7 Da    PI: 4.3089
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.K2UJHgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM94.22.1e-29251341127
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 
                  lp GfrF+Ptdeelv++yL++k++g+  e+  vi+e+d++k+ePwdLp ++     +  fF   +  y t  r +     g      ++ + ++++++
  Aradu.K2UJH  25 LPLGFRFRPTDEELVDFYLRQKINGNGDEV-WVIREIDVCKWEPWDLPGTI----LNSLFFQICQ-WYGT--RIRS----GS-----SSVHRTESGST 105
                  699************************999.89***************443....3456666654.4544..3322....21.....11222233778 PP

          NAM  99 lvglkktLvfykgrapkgektdWvmheyr 127
                  ++g+kktLvfy+grapkg++t+Wvmheyr
  Aradu.K2UJH 106 VIGMKKTLVFYTGRAPKGKRTNWVMHEYR 134
                  89**************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.02E-3919158IPR003441NAC domain
PROSITE profilePS5100532.8325158IPR003441NAC domain
PfamPF023652.1E-1826134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 681 aa     Download sequence    Send to blast
MGAVEVFQQQ PLVVDAAPVL SLNSLPLGFR FRPTDEELVD FYLRQKINGN GDEVWVIREI  60
DVCKWEPWDL PGTILNSLFF QICQWYGTRI RSGSSSVHRT ESGSTVIGMK KTLVFYTGRA  120
PKGKRTNWVM HEYRPTLQEL DGTNPGQNPY VLCRLFKKQD ESLEGSNGEE MERTTSTNLT  180
ANYSPEEIQS DPAVKSVSSS QATEDDKKLA VIPLTPEEAI SNVITPVGCQ SDGCDAYDAQ  240
NQIAAGDPSK EEDLQVNMDI FYDPSELFDD KLFSPLHKHI PEELFHQSNN EANGHFGLQH  300
QCGTNEISIS DFFDSVINWD EISGDNSSGQ TPNSAWFDVQ HNESWGNSNV DMVHARPLQV  360
GGADYPGDAT EGKLPLLKTR EFNPNTSYDN AISNNMGLFQ DHSQMAFSSD VNMLQGYLAT  420
NNYEQPTNFN MAMANSDNTG IRIRSRPPGY EGPNANSNMQ PQGTAPRRIR LARALAPQHT  480
SNEAAKDSSY ESKDRNSQVT TAREMETSKD LAAGESVTVT SDVEEQESSP VENKEFEDFN  540
TVQQSTSSAS SNLSTCSSDS EVSYEAEKES GWTSEDHSPK PAAAGASKAS EDQVPSECIN  600
DITDDVDESR IPNAYTLEVS KEESFSDSES KDSLLRRKVC YPSKSSSNLA KWYSVIAISA  660
TLVVLLAFLV NTWGYGYYLK V
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-242416216169NO APICAL MERISTEM PROTEIN
1ut4_B3e-242416216169NO APICAL MERISTEM PROTEIN
1ut7_A3e-242416216169NO APICAL MERISTEM PROTEIN
1ut7_B3e-242416216169NO APICAL MERISTEM PROTEIN
3swm_A3e-242416219172NAC domain-containing protein 19
3swm_B3e-242416219172NAC domain-containing protein 19
3swm_C3e-242416219172NAC domain-containing protein 19
3swm_D3e-242416219172NAC domain-containing protein 19
3swp_A3e-242416219172NAC domain-containing protein 19
3swp_B3e-242416219172NAC domain-containing protein 19
3swp_C3e-242416219172NAC domain-containing protein 19
3swp_D3e-242416219172NAC domain-containing protein 19
4dul_A3e-242416216169NAC domain-containing protein 19
4dul_B3e-242416216169NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.K2UJH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX5690451e-93JX569045.1 Glycine max NAC transcription factor (NAC012) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025609825.10.0protein NTM1-like 9 isoform X1
TrEMBLA0A444YAM60.0A0A444YAM6_ARAHY; Uncharacterized protein
STRINGGLYMA02G38710.11e-162(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55513353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49530.15e-57NAC domain containing protein 62