PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.JLC7N
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bZIP
Protein Properties Length: 442aa    MW: 49232.5 Da    PI: 9.3332
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.JLC7NgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.95.2e-09106145342
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 
                  + k  rr+++N eAA++sR+RKk ++++Le+    L +  
  Aradu.JLC7N 106 DQKTLRRLAQNCEAAKKSRLRKKTYVQQLENSRVRLAQLE 145
                  56889*************************8544444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.0E-7100149No hitNo description
SMARTSM003380.0046104182IPR004827Basic-leucine zipper domain
PfamPF001701.4E-6107148IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.19E-5109156No hitNo description
PROSITE patternPS000360111126IPR004827Basic-leucine zipper domain
SuperFamilySSF509782.9E-28184365IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.102.4E-29204365IPR015943WD40/YVTN repeat-like-containing domain
PROSITE profilePS5029416.559226365IPR017986WD40-repeat-containing domain
SMARTSM003203.7E-4242281IPR001680WD40 repeat
PfamPF128945.4E-5262349IPR024977Anaphase-promoting complex subunit 4, WD40 domain
SMARTSM003202.0E-4285325IPR001680WD40 repeat
PROSITE profilePS500828.503292334IPR001680WD40 repeat
SMARTSM0032064328368IPR001680WD40 repeat
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    Send to blast
MRLLLSSSHE LSRSCSCLTS SLHLRSRAAS SLLAGGLSSS LLVAVSSGSL RLLLIPIPNP  60
SIVILGDDSN TTPKTTTRLI DSDLAVALGK LVVVDSNDQT KLKHEDQKTL RRLAQNCEAA  120
KKSRLRKKTY VQQLENSRVR LAQLEQELQS SNFTVHRRPR MGGHRFIGMR TQHQKLTRKC  180
DIRGNIFLWA FKGVMDQNPS PFGHILLDQS FSPSCIMHPD TYLNKVLVGS EQGPMQLWNI  240
STKKKIFEFK GWDSPITCCV SSPALDVVAV GCADGSIHVH NIHYDKELVT FTHSTRGSVT  300
ALSFCTDGKP LLASGGSSGV ISVWNLEKKR LQPVVREAHD SVITSLHFFA NEPVLMSSSA  360
DNSIKNNLHE LWTLLNFLLP ETFSSAETFD EWFQISGKMV LLDKLLPKLK ERDSWVLIFL  420
QQGHGASEQE PGISRCYWRT NS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5oql_O3e-16208398182413Putative U3 snoRNP protein
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.JLC7N
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015944456.20.0WD repeat-containing protein 36-like isoform X1
RefseqXP_020988729.10.0WD repeat-containing protein 36-like isoform X1
TrEMBLA0A445B3M51e-172A0A445B3M5_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.16e-20bZIP family protein