PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.IHE1Z
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 282aa    MW: 32663 Da    PI: 6.0602
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.IHE1ZgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR178.31.4e-24133224191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  +fY++Y++  GF +r+ k+ k+ r+gei+++t+ C++eg+r+++  + ++++r+++++tr+gC+a++++k++  +  w+v +++ eHnH+l p
  Aradu.IHE1Z 133 RFYEQYSRAKGFAMRQGKKMKN-RKGEIVRYTYLCNREGFRHRKWLQmQDRKREHKVVTRCGCQAEMRIKRKAdSTSWYVCRFVDEHNHDLLP 224
                  5*****************9999.7788***************998775788889999***************9899**************975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.7E-22133224IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
LLNLIVLDSY SVYQHSDILL ARFATVLLCG FARYRVPGEV SAAETEPIFF NVFLMVHELD  60
AEDEENFNVS EDSENCDATE TLVDTGMEAE AEELEIESPD ERHGEQNGRA KHVMLSRAQI  120
LEMEFANSDE ACRFYEQYSR AKGFAMRQGK KMKNRKGEIV RYTYLCNREG FRHRKWLQMQ  180
DRKREHKVVT RCGCQAEMRI KRKADSTSWY VCRFVDEHNH DLLPAKFVSY LPAYRKISDV  240
DVAHIESLRQ VGISIPKIYE SIAAQAGGFN LVSFTKRDMY NV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.IHE1Z
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015972414.21e-163protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445CB861e-152A0A445CB86_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9185237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-21FAR1-related sequence 5