PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.HD2AV | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | WRKY | ||||||||
Protein Properties | Length: 1158aa MW: 131793 Da PI: 7.2176 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 68.5 | 1e-21 | 1082 | 1137 | 3 | 58 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 Dgy+WrKY qK++ g+ + r YYrC +gCp+kk+v+r ++dp++ itY+g+H++ Aradu.HD2AV 1082 DGYTWRKYDQKDILGTVHRREYYRCNGRGCPAKKRVQRIRDDPSLYRITYQGHHTC 1137 9*****************************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00931 | 8.5E-8 | 225 | 451 | IPR002182 | NB-ARC |
Gene3D | G3DSA:3.80.10.10 | 5.7E-26 | 489 | 681 | IPR032675 | Leucine-rich repeat domain, L domain-like |
SuperFamily | SSF52058 | 1.09E-29 | 507 | 714 | IPR032675 | Leucine-rich repeat domain, L domain-like |
Pfam | PF13855 | 1.1E-9 | 542 | 599 | IPR001611 | Leucine-rich repeat |
SMART | SM00369 | 21 | 565 | 588 | IPR003591 | Leucine-rich repeat, typical subtype |
SMART | SM00369 | 7.2 | 612 | 634 | IPR003591 | Leucine-rich repeat, typical subtype |
Gene3D | G3DSA:3.80.10.10 | 5.7E-26 | 788 | 956 | IPR032675 | Leucine-rich repeat domain, L domain-like |
SuperFamily | SSF52058 | 1.09E-29 | 790 | 957 | IPR032675 | Leucine-rich repeat domain, L domain-like |
PROSITE profile | PS50811 | 19.956 | 1075 | 1135 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 6.7E-23 | 1079 | 1138 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.92E-21 | 1079 | 1138 | IPR003657 | WRKY domain |
SMART | SM00774 | 5.1E-26 | 1080 | 1139 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.6E-21 | 1082 | 1137 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0043531 | Molecular Function | ADP binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1158 aa Download sequence Send to blast |
MKSEAGEFPK MEMKPFNILK TDMNELLKNK TADFFDKTKS EGASASQTST LTSLKSTNSS 60 LVSKNSLRRK RDLMSLLCSY PLDARMISDD FKSKPYDERQ LPLKLKGLLP KEIIRDAENG 120 DRSWSWSGSS FGDAHLDFIP EAILNLAADL SVHQLIQTLI SICKSENPNH TKCIRLSTRS 180 DVEKRTVEAK VTAALNDKHN MLDILNSFRR PLTIDASGYP TSEAENELKQ HICQLLQLST 240 IEDDDILCTR QIEDEMSRSR YLVILVDRDG EEIVDPQKVG LCSTLQSGVL VLITTDSPAS 300 QQAKEGGLTD ELVDLEIRTN DHLLPWVVFC HSVGKKFVYS SSAILTTAAH IVEECRSHLH 360 AILLVAKLLK NHQDVRKWDL ALFKLRCFNP SHDFHNFHGS NSIMIKAFLS LIWDGMKKIQ 420 QNCLLSCLVI PKIQEGMVDH ELMNHWMSYL FLDAGKTEKN LSQLVENSIF LQLNGVGGRY 480 IWLTEETYQI LERLHTSYPL FIEKSNLGLT EPSNTDKWHN AVRIELAGNK ISELPQSPDC 540 LRLKVLMLQN NADLTKIPSL FFDHMPLLCI LNLSYTSVRE LPRSLFFLEQ LRELYLKGCE 600 CFMKLPPEIG NLKKLEKLDL DETQITHLPK EVQKLTNMQS LTLCFYEYRV KKNRSYSCST 660 IIPSGVLSKL KRLEHLCIGV NPDDERWNEN VQAILPEILG LECLKTLSMY IPQLELLKLI 720 PAHIFKLDFR FTVGRHMQRI ISSIPPATDV EFKQSGCSLK FVKGEGVPDE IKMLLRNSKA 780 LFLDRHFTLQ SLSECEMKNI EQLRVCILAE CKEMQTIGGG GAAKDDEDML PHLLFLSLFH 840 MKNLRSIWEG PTPPRSSFGM LQSLSLQSCP KLITLFSVDF LGNFSLLKEL IVKDCPKLST 900 LVSCHSFRHI AHTFLPKLNK LLLLHLPELT SLSSGLHIGP VLKKIAFYDC PKLHSLSTRE 960 LISQELTVIK GESNWWRELE GRPCKFDQIF SPIHEEADIM SQLGTYEYDG DNMDSGSDWL 1020 HSHVKTGGSV AAPLHPIVDA NSLASSGKDF QKGSRVSKHR LLDRNCSLPT WDIETSDFME 1080 YDGYTWRKYD QKDILGTVHR REYYRCNGRG CPAKKRVQRI RDDPSLYRIT YQGHHTCGGQ 1140 AQLELSPTLI GELHRFSP |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.HD2AV |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025622441.1 | 0.0 | uncharacterized protein LOC112714955 | ||||
TrEMBL | A0A445BA42 | 0.0 | A0A445BA42_ARAHY; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF14479 | 4 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22570.1 | 5e-19 | WRKY DNA-binding protein 38 |