PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.H9U8I
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 477aa    MW: 51619.4 Da    PI: 7.0281
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.H9U8IgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.2e-20241290255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa+a+++a+++++g
  Aradu.H9U8I 241 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 290
                  7********.**********7.....337*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.0E-32241299IPR001471AP2/ERF domain
PfamPF008474.4E-14241290IPR001471AP2/ERF domain
PROSITE profilePS5103225.712241298IPR001471AP2/ERF domain
SuperFamilySSF541711.7E-22241299IPR016177DNA-binding domain
SMARTSM003808.6E-38241304IPR001471AP2/ERF domain
PRINTSPR003671.4E-11242253IPR001471AP2/ERF domain
CDDcd000185.52E-15249300No hitNo description
PRINTSPR003671.4E-11264280IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 477 aa     Download sequence    Send to blast
MCLVTTVAHQ RGSGEFIRFT AQRGGDGGDE EHGGGGGGRR SRSYEQEVGN KKEDEVERIT  60
MQGSMELSEI MLSALTNNVV SSGSSSSQSH QSGTDWFAAA SQHHPMMTSD FGHVSSLSSF  120
TSSSSSSASA SSSWVGQKRG REEQHHMIGA SSSSSSSSSQ SYQYQHQHHQ NLVQHPVPRF  180
FGTILGDFKV LPSHQPESSS VTEEASSITT AATAATVTTM TPATPSSEAA SYEETGERRR  240
RYRGVRQRPW GKWAAEIRDP HKAARVWLGT FDTAEAAARA YDEAALRFRG NRAKLNFPEN  300
VRAVPRPIQP PFSAAAATTT ATTHFHHPPP QMYHPEPLPP PPLVQHQQPQ FQGNNEIRDY  360
LEYSLLLQSS GDFHQHQQQQ INQQPSNLLQ QLYYNSQLAA LQSSSSSSSS SSVVPPASVF  420
SASAQPSSAS LPLFPSQQMV FFRPPGNQPH GGGDGAGGLN FLPSTWSDTS GYPPPPG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A6e-23240301163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1236241ERRRRY
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.H9U8I
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015967977.10.0ethylene-responsive transcription factor ABR1 isoform X2
TrEMBLA0A445CYQ40.0A0A445CYQ4_ARAHY; Uncharacterized protein
STRINGXP_007151985.12e-83(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49193253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.19e-15ethylene response factor 110