PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.H5KV7

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

NAC

Protein Properties

Length: 317aa MW: 36644.7 Da PI: 4.7176

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.H5KV7	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178.3	2.1e-55	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 lppGfrFhPtdeel+++yL +kv ++ + ++ +i e+d +k+ePwdLp + k +ekewyfF+ +dkky+tg+r+nrat +gyWkatgkd+e++++ + Aradu.H5KV7 7 LPPGFRFHPTDEELITHYLSQKVVASCFYATAIIGEADFNKCEPWDLPWRGKMGEKEWYFFCLKDKKYPTGERTNRATGAGYWKATGKDREIYNAkAK 104 79***********************999899***********8778899**********************************98566 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrle 129 +l+g+kktLvfykgrap+gekt+Wvmheyrle Aradu.H5KV7 105 ALIGMKKTLVFYKGRAPNGEKTNWVMHEYRLE 136 77**************************85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.14E-58	5	162	IPR003441	NAC domain
PROSITE profile	PS51005	58.756	7	162	IPR003441	NAC domain
Pfam	PF02365	4.2E-29	8	135	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence Send to blast
MNTKIELPPG FRFHPTDEEL ITHYLSQKVV ASCFYATAII GEADFNKCEP WDLPWRGKMG 60 EKEWYFFCLK DKKYPTGERT NRATGAGYWK ATGKDREIYN AKAKALIGMK KTLVFYKGRA 120 PNGEKTNWVM HEYRLEGDNK PSIYNLPKTT KKEWALCRVL HKSEKKVMHV PQPQGLVEFS 180 SYENKELPQL MDSSQVTFFS SDPNNQSEDP NPITRDDDNN NNDDIIVDSI ETPFLEQQPP 240 YYSSSYDSSD LDTLNPATWD ISENAPTSNA SKETDFDADM FSLMYNNREV FQTSFENQEY 300 YAYDSMGHVD NGSLWNF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	1e-48	3	162	13	165	NO APICAL MERISTEM PROTEIN
1ut4_B	1e-48	3	162	13	165	NO APICAL MERISTEM PROTEIN
1ut7_A	1e-48	3	162	13	165	NO APICAL MERISTEM PROTEIN
1ut7_B	1e-48	3	162	13	165	NO APICAL MERISTEM PROTEIN
3swm_A	2e-48	3	162	16	168	NAC domain-containing protein 19
3swm_B	2e-48	3	162	16	168	NAC domain-containing protein 19
3swm_C	2e-48	3	162	16	168	NAC domain-containing protein 19
3swm_D	2e-48	3	162	16	168	NAC domain-containing protein 19
3swp_A	2e-48	3	162	16	168	NAC domain-containing protein 19
3swp_B	2e-48	3	162	16	168	NAC domain-containing protein 19
3swp_C	2e-48	3	162	16	168	NAC domain-containing protein 19
3swp_D	2e-48	3	162	16	168	NAC domain-containing protein 19
4dul_A	1e-48	3	162	13	165	NAC domain-containing protein 19
4dul_B	1e-48	3	162	13	165	NAC domain-containing protein 19
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.H5KV7

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015946093.1	0.0	NAC domain-containing protein 92-like isoform X1
Refseq	XP_025625914.1	0.0	NAC domain-containing protein 92
TrEMBL	A0A445B314	0.0	A0A445B314_ARAHY; Uncharacterized protein
STRING	GLYMA13G05540.1	1e-109	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF29557	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39610.1	5e-85	NAC domain containing protein 6