PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.GY22L
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 350aa    MW: 39768.9 Da    PI: 4.6034
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.GY22LgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.41.1e-12151197455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   h ++Er+RR+++ + f  L   +P +     kK +Ka+iL +A++Y+k+Lq
  Aradu.GY22L 151 DHIMAERKRRQQLTQMFIALSATIPGL-----KKTDKASILGEAINYVKQLQ 197
                  599************************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.735147196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.09E-17149219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.3E-16152210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.9E-10152197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.73E-11152201No hitNo description
SMARTSM003531.3E-14153202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MEQCWENWPL HTEIEHHDHG DFFLSLEQCQ KPPDDDDDFL REILQMPPDF IDNHSTVDLV  60
TTGTAESAEG KRPRTFILSF DNSTIIPAMA EQQQPLGVGA GAATTTPLPS LSKKRNLLQK  120
PQQARIPVPV PVPQPQPGAA KRSRNDSQIV DHIMAERKRR QQLTQMFIAL SATIPGLKKT  180
DKASILGEAI NYVKQLQERV RELEKRNNDN KRGPTEPVIF LNKTQLLCRN NEDSTSEEEE  240
EEEEEEEVED WRSKEEKQVL PDVEARMLEK EKEVLIEIHC EKENGIEVKI LEQLENLHLS  300
VTGSSVLPFG NSTLGITIIA KMGDAYTMTL HDLLTNLRQL LLINNTTDPY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1155160ERKRRQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.GY22L
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015933468.10.0transcription factor bHLH18
TrEMBLA0A371HHV41e-93A0A371HHV4_MUCPR; Transcription factor bHLH25 (Fragment)
STRINGGLYMA13G44594.16e-94(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF131101230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-38bHLH family protein