 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Aradu.GUI8I |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
| Family |
SRS |
| Protein Properties |
Length: 368aa MW: 39181.9 Da PI: 7.3018 |
| Description |
SRS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aradu.GUI8I | genome | NCGR_PGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF702 | 222.8 | 7.1e-69 | 132 | 295 | 3 | 154 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrel.....kskkqsalsstklssae 95
+g++sCqdCGnqakkdC h+RCRtCCksrgfdC+thvkstWvpa+krrerqqqla+ ++++ a++ +kr+r++ ++ s+++s++ ss++
Aradu.GUI8I 132 AGGISCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPASKRRERQQQLASIQQQQLL--AADVPKRQRDHasstrLPTNPSSSASASGSSSS 227
6899***************************************************99777654..677777777772222222222222333333333 PP
DUF702 96 skkeletss..............lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
s++ + +P+ vss+a frcvrvs++dd e+e+aYqtav+igGhvfkGiLydqG+++
Aradu.GUI8I 228 SRR-----NyllasclvlswmenFPAVVSSPAEFRCVRVSGIDDTEDEYAYQTAVNIGGHVFKGILYDQGPDH 295
333.....24556699999999*************************************************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
| GO:0046982 | Molecular Function | protein heterodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 368 aa
Download sequence Send
to blast |
MAGLFSLGGG SSSSSGRGGR GNTNQQQQQH DQHQQHAEIP PSDTFYWYKN EDVSSYRGGL 60
ELWNHHHHHH QPEHDLIPQA RPLFHQDLYS SAAALGVGPT TVSDDQSPSR SAFLVTASAV 120
GSGAASGAGS GAGGISCQDC GNQAKKDCPH MRCRTCCKSR GFDCQTHVKS TWVPASKRRE 180
RQQQLASIQQ QQLLAADVPK RQRDHASSTR LPTNPSSSAS ASGSSSSSRR NYLLASCLVL 240
SWMENFPAVV SSPAEFRCVR VSGIDDTEDE YAYQTAVNIG GHVFKGILYD QGPDHATTTT 300
TNSSSYVAGD TSSTGAAAHH PNLNLIAPNT NTTTSALVSA AHTTQQLVDP SSMYPPPLST 360
FMAGSSAI
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP006643 | 1e-36 | AP006643.1 Lotus japonicus genomic DNA, chromosome 2, clone: LjT34A19, TM0249, complete sequence. |
| GenBank | AP006712 | 1e-36 | AP006712.1 Lotus japonicus genomic DNA, chromosome 2, clone: LjT17E09, TM0627, complete sequence. |
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT5G66350.1 | 3e-64 | Lateral root primordium (LRP) protein-related |
