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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Aradu.GFT3R |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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| Family |
LBD |
| Protein Properties |
Length: 258aa MW: 28369.6 Da PI: 7.4826 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aradu.GFT3R | genome | NCGR_PGC | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 122.2 | 2.7e-38 | 37 | 138 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97
+C aCk+lrrkC ++C++ap+f ++q +++fa+vhk+FGasnv+kll ++p ++r++a+ ++ yeA+ar++dPvyG+v++il+lqqq+++l+ el+++
Aradu.GFT3R 37 PCGACKFLRRKCISGCIFAPHFGSDQgAARFAAVHKVFGASNVSKLLLHIPVNRRHEAVVTISYEAQARLSDPVYGCVSTILALQQQVASLQGELSMV 134
7***********************9989********************************************************************** PP
DUF260 98 keel 101
+++l
Aradu.GFT3R 135 QNQL 138
9986 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009867 | Biological Process | jasmonic acid mediated signaling pathway |
| GO:1900150 | Biological Process | regulation of defense response to fungus |
| Sequence ? help Back to Top |
| Protein Sequence Length: 258 aa
Download sequence Send
to blast |
MSERQGVGDH GTNSGTRRKG AATKRAMAVA AAATVPPCGA CKFLRRKCIS GCIFAPHFGS 60
DQGAARFAAV HKVFGASNVS KLLLHIPVNR RHEAVVTISY EAQARLSDPV YGCVSTILAL 120
QQQVASLQGE LSMVQNQLIN SRFAYANVLH QCTQQHHHHH HHDNNQPNMI NVSLLQQPAY 180
SNNNSSASTN NNLVNMNTFN NNNNNHSGFE LAMEAAPSSP PHSFEPLRLS QENNDEDDEE 240
ESIIIPQLFN HEIVLHRQ
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