PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Aradu.G8ZY2

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 436aa MW: 50171.1 Da PI: 9.3148

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.G8ZY2	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	56.6	8.5e-18	51	136	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fY++YAk +GFs+r+ +++k+ +ei+++ +Cs+egk +++ ++ +++t+++ +C a++ ++ k w ++k++l+H+H+++ Aradu.G8ZY2 51 RFYKDYAKAAGFSTRVWSTNKK--GNEIKNQLITCSREGKWKSKISS---TKKTNPTAGLNCPARIYIHTLKdVRAWIISKVVLHHSHPCC 136 5*************998877..8889**********99877...999***********9988799***********987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	5.4E-15	51	136	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence Send to blast
MDDSTSDCQL NQGEVDFEFE SNEVLDPLCV VDDQLVPKVG MTFKTLEDAA RFYKDYAKAA 60 GFSTRVWSTN KKGNEIKNQL ITCSREGKWK SKISSTKKTN PTAGLNCPAR IYIHTLKDVR 120 AWIISKVVLH HSHPCCSTQA EMLKQHRKLS MSIRRTIENN EKAGMRSTQK SESMHSFFNN 180 SLIQFVKQYD NCLGSREQVE RESDATDFYT FREVQAQFRE KANCITRLTN FALGYSVYEV 240 GEQVSNSIFN KFVVTYDSVA AEVKCQCLLF ESRGILRRHA LSVLSFERVS QVSPRYILER 300 WSKKVKRRYT HIKSNHDETL LEPRSKRFVE LIFHSQNICE FTSESEELTA ILHRAYDNVM 360 VEMEELKAKR KGTCLLSHED ANLESVNELQ SPPRVRTRGR PKNRLGSKLD KQITNASKKK 420 KTKALNELNL FDAASV

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence Send to blast

MDDSTSDCQL NQGEVDFEFE SNEVLDPLCV VDDQLVPKVG MTFKTLEDAA RFYKDYAKAA  60
GFSTRVWSTN KKGNEIKNQL ITCSREGKWK SKISSTKKTN PTAGLNCPAR IYIHTLKDVR  120
AWIISKVVLH HSHPCCSTQA EMLKQHRKLS MSIRRTIENN EKAGMRSTQK SESMHSFFNN  180
SLIQFVKQYD NCLGSREQVE RESDATDFYT FREVQAQFRE KANCITRLTN FALGYSVYEV  240
GEQVSNSIFN KFVVTYDSVA AEVKCQCLLF ESRGILRRHA LSVLSFERVS QVSPRYILER  300
WSKKVKRRYT HIKSNHDETL LEPRSKRFVE LIFHSQNICE FTSESEELTA ILHRAYDNVM  360
VEMEELKAKR KGTCLLSHED ANLESVNELQ SPPRVRTRGR PKNRLGSKLD KQITNASKKK  420
KTKALNELNL FDAASV

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.G8ZY2

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HQ637178	0.0	HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020986710.1	1e-164	protein FAR-RED ELONGATED HYPOCOTYL 3-like
TrEMBL	A0A445A1M9	0.0	A0A445A1M9_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	6e-16	far-red elongated hypocotyls 3