PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.G4SB3
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Nin-like
Protein Properties Length: 1403aa    MW: 156102 Da    PI: 6.0582
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.G4SB3genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK89.23.4e-28536586252
       RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                  ek+ s ++l++yFs+++kdAAk+Lgvc+T+LKriCRq+GI+RWP+Rki+++
  Aradu.G4SB3 536 EKNFSSSVLQQYFSGSLKDAAKSLGVCPTTLKRICRQHGISRWPSRKINKV 586
                  78999********************************************97 PP
2RWP-RK90.51.3e-2810941144252
       RWP-RK    2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52  
                   +k++sl++l++yFs ++kdAAk+Lgvc+T+LKriCRq+GI+RWP+Rki+++
  Aradu.G4SB3 1094 KKNVSLSVLQQYFSCSLKDAAKSLGVCPTTLKRICRQHGIARWPSRKINKV 1144
                   799**********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151916.927518606IPR003035RWP-RK domain
PfamPF020427.5E-26540586IPR003035RWP-RK domain
PROSITE profilePS5174511.713727817IPR000270PB1 domain
SuperFamilySSF542771.15E-14737816No hitNo description
SMARTSM006662.0E-9742817IPR000270PB1 domain
Gene3DG3DSA:3.10.20.2401.7E-13755816No hitNo description
PfamPF005642.9E-10756816IPR000270PB1 domain
PROSITE profilePS5151917.27910761164IPR003035RWP-RK domain
PfamPF020423.0E-2610961144IPR003035RWP-RK domain
SuperFamilySSF542775.05E-2013041394No hitNo description
Gene3DG3DSA:3.10.20.2402.5E-2113071390No hitNo description
SMARTSM006667.5E-1813101392IPR000270PB1 domain
PROSITE profilePS5174518.69813101392IPR000270PB1 domain
PfamPF005642.4E-1413131391IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1403 aa     Download sequence    Send to blast
MEDQFFSEGE GIGYWTPPGA QFDGPSMIDN GIKNLVSEEM LDNLPDLMNF DNLAGWDCGN  60
YNATETSLGF DEKAVLQQLE TQLGLSEDAN DMNNINGSLR ELSAADMGNC LVPRPFAWSL  120
DERMLRAMDL FKESVGDGIL TQVWAPMKHG NDFILSTSEQ PYLLDHMLAG YRDVSRQFTF  180
SAEDKPGSFP GLPGRVFNSQ IPEWTSNVGY YNKSEYLRVE HAINHEVRGS IAVPIIDTLA  240
EPPCCAILEL VTTKEKTDFD RELEIVSSAL QLVNLRTTTP PRLMSQCLSN NKRAALAEII  300
DVLRAVCHAH RLPLALTWIP CYYSEGIGDE ASRIRIKDGG RIPGEKTVLC IEESACYIND  360
IVVGGFVHAC VEHYLEEGQG AAGKALQSNR PFFCPDVKAY NISEYPLVHH ARKYKLNAAV  420
AVRLRSIHTN DDDYIIEFFL PVNMNGSEEQ QLLLDNLSDT VQRMCQSLRI VSDAELHGIE  480
GSQVQFSKEE GSHMAPDGDH DLVQPMSMTN NETEAAHNQA MDGSRKQTEK KKSSVEKNFS  540
SSVLQQYFSG SLKDAAKSLG VCPTTLKRIC RQHGISRWPS RKINKVNRSL KKIQTVLDSV  600
KGVEGGLEFD PYKGGFMPGG SSNQEINAHK SSLFGKKCSV KYPDPASGSK DSKPIAMDDG  660
GLRQEPFPVS ILESSWCDIA YHSPNTLVAD EMADKLGEHH NPTTSSMSDS SNGSGSILRG  720
SRKFEKRKHL KAKSPCVDNG SKLVVKAAYG EDRIPGCLQL YEEVATRFKL QIGSFQLKYL  780
DDDEEWVMIV TNSDLRECIE IFDDLGTRAV KFLVSETCLV ERTLRHDYAS SKYLFSEDWL  840
FSVRCLSNNK RAALTEIIDV LRAVCRAHSL PLALTWIPCY YSEGIGDEAS RIRTKEGRKL  900
PGEKTVLCIE ESACYMNDIV VGGFVRACVE HYLEEGQGAA GKALQSNRPF FCPDVKAYNI  960
SEYPLVHHAR KYKLNAAVAI RLRSTHTNDD DYIIEFFLPL NMNRCQEQQV LLENLSRTMQ  1020
RMCQTLRKVS DAELYGIEGS QVQFSKEEGS HMAPDGNHDS VQPMSMTNNE TEAAHNQAME  1080
GSRKQIEKKR SPVKKNVSLS VLQQYFSCSL KDAAKSLGVC PTTLKRICRQ HGIARWPSRK  1140
INKVNRSLKK IRTVLDSVQG VEGGLKFDPY KGGFMSVGSS NQEINAHKSS LFRKKCSVKY  1200
PDPASGSKDS KPIAMGDGGL RQEPFPVSIL ESFWCDIAYH SPNSLVADEM ETYLNGADKL  1260
GEHYNPTTSS MTDSSNGSCS ILRSSSSASG KFENRKHLKA KSPCVDSGSK IIVKAAYGED  1320
LIRFKFDPAA GCLQLYEEVA ARFKLQIGSF QLKYLDDEEE WVRMANDSDL EDCIEMLDDL  1380
DTRAVKLLVH DMPSGLSSLG SNG
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.G4SB3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025686428.10.0protein NLP8 isoform X2
SwissprotO228640.0NLP8_ARATH; Protein NLP8
TrEMBLA0A445E3U80.0A0A445E3U8_ARAHY; Uncharacterized protein
STRINGGLYMA12G05390.40.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34643465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43500.20.0Nin-like family protein
Publications ? help Back to Top
  1. Yan D, et al.
    NIN-like protein 8 is a master regulator of nitrate-promoted seed germination in Arabidopsis.
    Nat Commun, 2016. 7: p. 13179
    [PMID:27731416]