PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.FD4R7
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bZIP
Protein Properties Length: 158aa    MW: 18493.9 Da    PI: 9.2003
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.FD4R7genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.81e-122767444
                 XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44
                  k+ +rkq+NRe+ArrsR RK++ ++ L  +v++L++eN +
  Aradu.FD4R7 27 QKKRKRKQSNRESARRSRMRKQKHLDDLVAEVEKLKKENNE 67
                 6999***********************************75 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.9E-162488IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.9E-102569No hitNo description
PROSITE profilePS5021710.7832689IPR004827Basic-leucine zipper domain
PfamPF001706.3E-102868IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.46E-112880No hitNo description
CDDcd147021.16E-172979No hitNo description
PROSITE patternPS0003603146IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    Send to blast
MASSSGNSST STKFCGSEED LQLLMDQKKR KRKQSNRESA RRSRMRKQKH LDDLVAEVEK  60
LKKENNEILT GVKITTQKFL NIEGENSILR VQMSELTKRL ESLNHMLSFF NNNNNTITST  120
STIFDSEFYH DYNFMNHHHI NMCLNQPIMA SSNHMFEW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12732KKRKRK
24047RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.FD4R7
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015969681.11e-114bZIP transcription factor 11
SwissprotC0Z2L53e-40BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A445CK691e-111A0A445CK69_ARAHY; Uncharacterized protein
STRINGXP_004499193.17e-54(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61334147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.12e-36basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]