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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Aradu.F8RAG |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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| Family |
MYB |
| Protein Properties |
Length: 295aa MW: 33654.7 Da PI: 5.4773 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aradu.F8RAG | genome | NCGR_PGC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 57.9 | 2.3e-18 | 23 | 70 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd++l+ +++++G g+W++ ++ g+ R++k+c++rw +yl
Aradu.F8RAG 23 KGPWTAEEDQILISYIQKHGHGNWRALPKQAGLLRCGKSCRLRWINYL 70
79******************************99************97 PP
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| 2 | Myb_DNA-binding | 52.1 | 1.5e-16 | 76 | 121 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++T eE+e +++++++lG++ W++Ia++++ gRt++++k+ w+++l
Aradu.F8RAG 76 RGNFTIEEEETIIKLHEMLGNR-WSAIAAKLP-GRTDNEIKNVWHTHL 121
89********************.*********.************986 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 295 aa
Download sequence Send
to blast |
QHKKLQEAKM VRAPCCEKMG LKKGPWTAEE DQILISYIQK HGHGNWRALP KQAGLLRCGK 60
SCRLRWINYL RPDIKRGNFT IEEEETIIKL HEMLGNRWSA IAAKLPGRTD NEIKNVWHTH 120
LKKRLIKPNQ MNSSSSDTKR VSNKSKIKRS DSNSSTITVQ SSEPASLNSN FPEVDTTSAS 180
CTTTTTTTSS EFSSATNTGE RKIMNMMNIK NEELEDSLEN IIDESLWTEA GIDDETTNMT 240
ISNNELPSLQ YYDPVFNNSE ENLCFQPSAN FEDDGMDFWY DIFIRTGESI ELPEF
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor involved in cold-regulation of CBF genes and in the development of freezing tolerance. May be part of a complex network of transcription factors controlling the expression of CBF genes and other genes in response to cold stress. Binds to the MYB recognition sequences in the promoters of CBF1, CBF2 and CBF3 genes (PubMed:17015446). Involved in drought and salt tolerance. May enhance expression levels of genes involved in abscisic acid (ABA) biosynthesis and signaling, as well as those encoding stress-protective proteins (PubMed:19161942). {ECO:0000269|PubMed:17015446, ECO:0000269|PubMed:19161942}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by abscisic acid (ABA) and drought stress (PubMed:19161942). Induced by salt stress (PubMed:19161942). {ECO:0000269|PubMed:19161942}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KF208660 | 0.0 | KF208660.1 Arachis hypogaea putative R2R3 MYB protein 6 (MYB6) gene, complete cds. |
| Publications
? help Back to Top |
- Schnaubelt D, et al.
Low glutathione regulates gene expression and the redox potentials of the nucleus and cytosol in Arabidopsis thaliana.
Plant Cell Environ., 2015. 38(2): p. 266-79
[PMID:24329757] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Ma X, et al.
CYCLIN-DEPENDENT KINASE G2 regulates salinity stress response and salt mediated flowering in Arabidopsis thaliana.
Plant Mol. Biol., 2015. 88(3): p. 287-99
[PMID:25948280] - Kim SH, et al.
Phosphorylation of the transcriptional repressor MYB15 by mitogen-activated protein kinase 6 is required for freezing tolerance in Arabidopsis.
Nucleic Acids Res., 2017. 45(11): p. 6613-6627
[PMID:28510716] - Chezem WR,Memon A,Li FS,Weng JK,Clay NK
SG2-Type R2R3-MYB Transcription Factor MYB15 Controls Defense-Induced Lignification and Basal Immunity in Arabidopsis.
Plant Cell, 2017. 29(8): p. 1907-1926
[PMID:28733420] - Pal S, et al.
TransDetect Identifies a New Regulatory Module Controlling Phosphate Accumulation.
Plant Physiol., 2017. 175(2): p. 916-926
[PMID:28827455]
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