PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.EW4Y3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 249aa    MW: 29900.4 Da    PI: 4.7036
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.EW4Y3genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR146.11.6e-1492161170
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkk 70 
                  +fY +Y+k+ GFs rksk+ k+  +gei+++ fvC ++g+r e+  + +++++++r etrtgC+a++   +
  Aradu.EW4Y3  92 DFYMKYSKSKGFSARKSKTFKN-SSGEIYRQMFVCHRQGFRMEKYYTmEKRKKEPRLETRTGCEARMDHFQ 161
                  6*****************9998.8899****************998856777789************7555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.1E-1292160IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MNEQYQEDDD FNQQEELVSD QDMMDEQNEF EQDFRDEFTE GAFFSESDMS DYILEAAYAV  60
DSVQDITSLK FSENVVEEID KYHFSTLHLA FDFYMKYSKS KGFSARKSKT FKNSSGEIYR  120
QMFVCHRQGF RMEKYYTMEK RKKEPRLETR TGCEARMDHF QRCVAHMRFN EFNADYESTR  180
GVPVMQTCIE LLERYAAELY THEIFLFFRP FFSRAGSMRV LNIDNTDDCI KYIVCKHGRP  240
DFTWTVDFR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.EW4Y3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020999439.11e-105protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444YN341e-117A0A444YN34_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.18e-08FAR1-related sequence 10