PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.EEX52 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | Trihelix | ||||||||
Protein Properties | Length: 566aa MW: 64268.1 Da PI: 9.6979 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 98.5 | 5.6e-31 | 41 | 126 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rW++qe+laL+++r++m++ +r+++lk+plWeevs+k+ e g++rs+k+Ckek+en+ k++k++ke+++++++++++t+++fdql+ Aradu.EEX52 41 RWPRQETLALLKIRSDMDSVFRDSSLKGPLWEEVSRKLGELGYHRSAKKCKEKFENVYKYHKRTKENRSGKSEGKTKTYKFFDQLQ 126 8***********************************************************************************98 PP | |||||||
2 | trihelix | 104.6 | 7.1e-33 | 399 | 484 | 1 | 87 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r++me +++++ k+plWe++s+ m++ g++rs+k+Ckekwen+nk++kk+ke++k+r e+s+tcpyf++l+a Aradu.EEX52 399 RWPKAEVHALIRLRTSMEPKYQENGPKAPLWEDISAGMQRLGYNRSAKRCKEKWENINKYFKKVKESKKQR-REDSKTCPYFHELDA 484 8********************************************************************98.78999********85 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00717 | 0.0039 | 38 | 100 | IPR001005 | SANT/Myb domain |
PROSITE profile | PS50090 | 6.911 | 40 | 98 | IPR017877 | Myb-like domain |
Pfam | PF13837 | 3.1E-19 | 40 | 128 | No hit | No description |
CDD | cd12203 | 3.94E-23 | 40 | 105 | No hit | No description |
SMART | SM00717 | 0.02 | 396 | 458 | IPR001005 | SANT/Myb domain |
PROSITE profile | PS50090 | 7.085 | 398 | 456 | IPR017877 | Myb-like domain |
Gene3D | G3DSA:1.10.10.60 | 9.7E-4 | 398 | 455 | IPR009057 | Homeodomain-like |
Pfam | PF13837 | 7.4E-23 | 398 | 485 | No hit | No description |
CDD | cd12203 | 3.31E-27 | 398 | 463 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 566 aa Download sequence Send to blast |
MQLGDPTVLE TSTGEAAAAE GGGEAIGGDE GEKMNFGGGN RWPRQETLAL LKIRSDMDSV 60 FRDSSLKGPL WEEVSRKLGE LGYHRSAKKC KEKFENVYKY HKRTKENRSG KSEGKTKTYK 120 FFDQLQALEN HQFTLSYNPT PKPQPPPTLP TNTLPLLPTS SSDATTTTTT VPSTNPTPPP 180 TTTTTVVTNP NNPSSQQNIN NINNTDSRVQ HSLPIMNNLF SSTSTSSSTA SDEDLEEKYR 240 NKRKWKEYFR RLTRQVLAKQ EEMQKRFLEA IDKREREQVA QQDAWRMQEM TRINREHDIL 300 VQERSTAAAK DAAVIAFLQK LSGQQQTPPP QPPITVSFGA NFFQQPTPTP TPTPTPVQVQ 360 PPPQPQPQPQ PQPQKQLQPP ALTNGDSSPC PLTSPSSSRW PKAEVHALIR LRTSMEPKYQ 420 ENGPKAPLWE DISAGMQRLG YNRSAKRCKE KWENINKYFK KVKESKKQRR EDSKTCPYFH 480 ELDALYREKS KGHNTNTFSF HITNKTNEMM MEPLMVQPEQ QWRPPPQQQQ DKDVDKSTYL 540 TDFYVMNNGP SQKEIIGFVG QIPEPP |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.EEX52 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015942556.1 | 0.0 | trihelix transcription factor GT-2 | ||||
Refseq | XP_025621111.1 | 0.0 | trihelix transcription factor GT-2 | ||||
TrEMBL | A0A445BDH6 | 0.0 | A0A445BDH6_ARAHY; Uncharacterized protein | ||||
STRING | XP_007143537.1 | 0.0 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF373 | 34 | 181 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76880.1 | 5e-77 | Trihelix family protein |