PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.EEX52
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Trihelix
Protein Properties Length: 566aa    MW: 64268.1 Da    PI: 9.6979
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.EEX52genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix98.55.6e-3141126186
     trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                  rW++qe+laL+++r++m++ +r+++lk+plWeevs+k+ e g++rs+k+Ckek+en+ k++k++ke+++++++++++t+++fdql+
  Aradu.EEX52  41 RWPRQETLALLKIRSDMDSVFRDSSLKGPLWEEVSRKLGELGYHRSAKKCKEKFENVYKYHKRTKENRSGKSEGKTKTYKFFDQLQ 126
                  8***********************************************************************************98 PP

2trihelix104.67.1e-33399484187
     trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                  rW+k ev+aLi++r++me +++++  k+plWe++s+ m++ g++rs+k+Ckekwen+nk++kk+ke++k+r  e+s+tcpyf++l+a
  Aradu.EEX52 399 RWPKAEVHALIRLRTSMEPKYQENGPKAPLWEDISAGMQRLGYNRSAKRCKEKWENINKYFKKVKESKKQR-REDSKTCPYFHELDA 484
                  8********************************************************************98.78999********85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.003938100IPR001005SANT/Myb domain
PROSITE profilePS500906.9114098IPR017877Myb-like domain
PfamPF138373.1E-1940128No hitNo description
CDDcd122033.94E-2340105No hitNo description
SMARTSM007170.02396458IPR001005SANT/Myb domain
PROSITE profilePS500907.085398456IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.609.7E-4398455IPR009057Homeodomain-like
PfamPF138377.4E-23398485No hitNo description
CDDcd122033.31E-27398463No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 566 aa     Download sequence    Send to blast
MQLGDPTVLE TSTGEAAAAE GGGEAIGGDE GEKMNFGGGN RWPRQETLAL LKIRSDMDSV  60
FRDSSLKGPL WEEVSRKLGE LGYHRSAKKC KEKFENVYKY HKRTKENRSG KSEGKTKTYK  120
FFDQLQALEN HQFTLSYNPT PKPQPPPTLP TNTLPLLPTS SSDATTTTTT VPSTNPTPPP  180
TTTTTVVTNP NNPSSQQNIN NINNTDSRVQ HSLPIMNNLF SSTSTSSSTA SDEDLEEKYR  240
NKRKWKEYFR RLTRQVLAKQ EEMQKRFLEA IDKREREQVA QQDAWRMQEM TRINREHDIL  300
VQERSTAAAK DAAVIAFLQK LSGQQQTPPP QPPITVSFGA NFFQQPTPTP TPTPTPVQVQ  360
PPPQPQPQPQ PQPQKQLQPP ALTNGDSSPC PLTSPSSSRW PKAEVHALIR LRTSMEPKYQ  420
ENGPKAPLWE DISAGMQRLG YNRSAKRCKE KWENINKYFK KVKESKKQRR EDSKTCPYFH  480
ELDALYREKS KGHNTNTFSF HITNKTNEMM MEPLMVQPEQ QWRPPPQQQQ DKDVDKSTYL  540
TDFYVMNNGP SQKEIIGFVG QIPEPP
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.EEX52
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015942556.10.0trihelix transcription factor GT-2
RefseqXP_025621111.10.0trihelix transcription factor GT-2
TrEMBLA0A445BDH60.0A0A445BDH6_ARAHY; Uncharacterized protein
STRINGXP_007143537.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37334181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.15e-77Trihelix family protein